C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 258
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134825 TMEM258 9606 - 11:61768501-61792802 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257262 TMEM258-005 61789130-61792601 nonsense_mediated_decay
  ENST00000535042 TMEM258-008 61768501-61790603 processed_transcript
  ENST00000535297 TMEM258-002 61789130-61792616 nonsense_mediated_decay
  ENST00000537328 TMEM258-001 61788963-61792610 protein_coding
  ENST00000540434 TMEM258-003 61790097-61792602 retained_intron
  ENST00000541893 TMEM258-006 61789130-61792580 nonsense_mediated_decay
  ENST00000543510 TMEM258-007 61789131-61792802 protein_coding
  ENST00000545210 TMEM258-004 61789130-61792594 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257262ENST00000537328ENST00000541893
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257262 44.852±0.00 N/A N/A 95.226±0.00 77.453±0.00 99.800±0.00 92.503±0.00 113.493±0.00 84.563±0.00 N/A N/A 112.690±0.00
ENST00000537328 N/A 7.555±0.00 22.165±0.00 17.478±0.00 22.844±0.00 N/A N/A 22.016±0.00 17.515±0.00 83.667±59.46 147.065±5.85 N/A
ENST00000541893 33.732±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0001 VISTA 11:61244303-61847279

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078785 tmem258 transmembrane protein 258 protein_coding Danio_rerio
ENSMUSG00000036372 Tmem258 transmembrane protein 258 protein_coding Mus_musculus

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