C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 258
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036372 Tmem258 10090 + 19:10204014-10207824 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040372 Tmem258-001 10204014-10207824 protein_coding
  ENSMUST00000127878 Tmem258-003 10204218-10207818 retained_intron
  ENSMUST00000153854 Tmem258-002 10204014-10207824 processed_transcript
  ENSMUST00000166412 Tmem258-201 10206033-10207824 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040372ENSMUST00000127878ENSMUST00000166412
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040372 45.880±5.73 49.577±5.17 39.282±0.41 33.063±18.98 51.655±20.15 58.783±6.15 78.827±12.59 65.634±4.27 75.699±29.14 36.742±5.92 36.429±8.52 44.398±7.83 66.203±33.11 134.323±54.88
ENSMUST00000127878 6.193±0.00 N/A 4.415±0.00 N/A 7.194±0.00 N/A N/A N/A N/A N/A N/A N/A 2.924±0.00 N/A
ENSMUST00000166412 N/A N/A N/A N/A 44.787±0.00 N/A N/A N/A N/A N/A 12.381±0.82 138.930±0.00 195.255±17.73 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0002 VISTA 19:10121785-10724671
CIL_000057 CIL_000057_0002 CGP 19:10204014-10240748

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078785 tmem258 transmembrane protein 258 protein_coding Danio_rerio
ENSG00000134825 TMEM258 transmembrane protein 258 protein_coding Homo_sapiens

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