C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: STT3A, subunit of the oligosaccharyltransferase complex (catalytic)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134910 STT3A 9606 + 11:125591712-125625215 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000392708 STT3A-001 125592795-125623091 protein_coding
  ENST00000524639 STT3A-012 125609419-125613151 retained_intron
  ENST00000525431 STT3A-010 125606210-125608404 retained_intron
  ENST00000525652 STT3A-005 125593169-125602839 protein_coding
  ENST00000525946 STT3A-013 125613684-125621226 retained_intron
  ENST00000526213 STT3A-008 125602757-125606465 retained_intron
  ENST00000526364 STT3A-014 125618518-125625215 processed_transcript
  ENST00000526726 STT3A-016 125606413-125613070 protein_coding
  ENST00000527456 STT3A-009 125603377-125606465 processed_transcript
  ENST00000527606 STT3A-006 125591712-125602889 protein_coding
  ENST00000529196 STT3A-002 125592836-125620888 protein_coding
  ENST00000529886 STT3A-007 125594863-125602884 protein_coding
  ENST00000531001 STT3A-011 125608148-125609736 processed_transcript
  ENST00000531491 STT3A-003 125592867-125620888 protein_coding
  ENST00000531599 STT3A-015 125610709-125613140 retained_intron
  ENST00000534472 STT3A-004 125592819-125609898 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392708ENST00000525946ENST00000526213ENST00000527456ENST00000529196ENST00000531491ENST00000534472
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392708 N/A N/A N/A 2.936±0.00 3.123±0.00 1.979±0.00 2.303±0.00 3.607±1.58 2.477±0.00 1.415±0.00 0.185±0.00 3.565±0.00 4.049±0.00 5.161±0.00
ENST00000525946 14.618±0.00 9.102±0.00 N/A 6.961±0.00 12.459±3.75 10.104±1.58 2.900±0.00 11.385±4.20 9.950±2.75 6.301±1.54 2.556±1.83 29.278±12.55 21.665±0.00 19.804±3.39
ENST00000526213 N/A N/A 34.019±0.00 N/A N/A 33.134±0.00 11.370±0.00 40.186±0.00 26.696±0.00 17.093±0.00 N/A N/A N/A N/A
ENST00000527456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.376±0.00 N/A N/A N/A
ENST00000529196 N/A N/A N/A N/A N/A 5.474±0.00 5.767±0.00 N/A 8.698±0.00 9.804±0.00 8.622±0.00 22.153±8.32 24.628±7.90 N/A
ENST00000531491 36.879±0.00 25.676±0.00 11.624±0.00 10.481±0.17 27.323±0.93 20.976±6.17 8.623±3.30 29.219±7.22 22.711±7.74 17.153±7.55 5.205±2.70 55.814±16.44 31.661±1.89 42.095±4.72
ENST00000534472 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.189±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004576 IEA oligosaccharyl transferase activity
GO:0004579 IMP dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006486 IEA protein glycosylation
GO:0008250 ISS oligosaccharyltransferase complex
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0018279 ISS protein N-linked glycosylation via asparagine
GO:0043686 IMP co-translational protein modification
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053832 itm1 integral membrane protein 1 protein_coding Danio_rerio
ENSMUSG00000032116 Stt3a STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein_coding Mus_musculus

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