C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein, transmembrane 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135119 RNFT2 9606 + 12:116738178-116853631 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257575 RNFT2-001 116738291-116851762 protein_coding
  ENST00000319176 RNFT2-004 116738311-116852945 protein_coding
  ENST00000392549 RNFT2-201 116738291-116853629 protein_coding
  ENST00000407967 RNFT2-002 116738291-116853631 protein_coding
  ENST00000547718 RNFT2-003 116738338-116852941 nonsense_mediated_decay
  ENST00000551251 RNFT2-006 116835997-116852945 processed_transcript
  ENST00000552920 RNFT2-005 116738316-116740839 retained_intron
  ENST00000615278 RNFT2-007 116738178-116738694 processed_transcript
  ENST00000622220 RNFT2-202 116738311-116852941 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000257575ENST00000319176ENST00000392549ENST00000407967ENST00000547718ENST00000551251ENST00000622220
Transcript ID Adrenal Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000257575 0.621±0.00 N/A N/A N/A 0.143±0.08 0.190±0.04 0.179±0.00 N/A N/A N/A N/A
ENST00000319176 N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392549 N/A N/A 1.872±0.91 0.192±0.00 N/A N/A N/A N/A N/A 0.466±0.00 0.507±0.00
ENST00000407967 N/A N/A 1.488±0.00 N/A 0.053±0.00 N/A N/A 0.024±0.00 0.247±0.04 0.233±0.00 N/A
ENST00000547718 N/A N/A N/A N/A N/A 0.156±0.00 0.069±0.00 N/A N/A N/A N/A
ENST00000551251 N/A N/A N/A 0.209±0.00 N/A N/A 0.380±0.16 0.239±0.00 0.827±0.29 1.213±0.27 2.482±0.65
ENST00000622220 N/A 0.397±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0009055 IEA electron carrier activity
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053019 rnft2 ring finger protein, transmembrane 2 protein_coding Danio_rerio
ENSMUSG00000032850 Rnft2 ring finger protein, transmembrane 2 protein_coding Mus_musculus

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