C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trophinin associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135451 TROAP 9606 + 12:49323236-49331731 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257909 TROAP-001 49323279-49331731 protein_coding
  ENST00000380327 TROAP-002 49323255-49324392 protein_coding
  ENST00000546735 TROAP-006 49323257-49329598 nonsense_mediated_decay
  ENST00000546776 TROAP-011 49323279-49329061 nonsense_mediated_decay
  ENST00000547807 TROAP-016 49323310-49327327 protein_coding
  ENST00000547923 TROAP-008 49326641-49331708 protein_coding
  ENST00000548311 TROAP-005 49323255-49324416 protein_coding
  ENST00000548817 TROAP-012 49325453-49326720 retained_intron
  ENST00000549275 TROAP-013 49323236-49324296 protein_coding
  ENST00000549534 TROAP-010 49323273-49324365 protein_coding
  ENST00000549891 TROAP-004 49323255-49329634 nonsense_mediated_decay
  ENST00000550346 TROAP-015 49323256-49327331 protein_coding
  ENST00000550709 TROAP-009 49323257-49324380 protein_coding
  ENST00000551192 TROAP-007 49323283-49329785 nonsense_mediated_decay
  ENST00000551245 TROAP-003 49323244-49331670 protein_coding
  ENST00000551567 TROAP-014 49323374-49325505 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257909ENST00000380327ENST00000547923ENST00000548311ENST00000549275ENST00000549534ENST00000549891ENST00000551192ENST00000551245ENST00000551567
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257909 N/A N/A N/A N/A N/A N/A N/A 0.303±0.00 N/A 4.557±3.69 0.618±0.23 6.376±1.76
ENST00000380327 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.410±0.00 1.217±0.00 N/A
ENST00000547923 N/A N/A 0.312±0.00 0.375±0.00 N/A 0.055±0.00 N/A N/A 0.053±0.00 N/A N/A N/A
ENST00000548311 0.641±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.109±0.92 N/A
ENST00000549275 N/A N/A N/A 2.727±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549534 N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A N/A N/A N/A
ENST00000549891 N/A N/A N/A N/A N/A 0.293±0.00 N/A N/A N/A N/A 0.677±0.00 N/A
ENST00000551192 N/A 0.751±0.00 N/A N/A 0.263±0.00 N/A 0.149±0.00 N/A N/A N/A N/A N/A
ENST00000551245 N/A 0.286±0.00 N/A N/A N/A N/A 0.018±0.00 N/A N/A 2.266±1.50 0.212±0.06 N/A
ENST00000551567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.429±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009Q CIL_00009Q_0001 CGP 12:49293252-49331731
CIL_0001M2 CIL_0001M2_0001 CGP 12:49323236-49337188

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0007155 IEA cell adhesion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000032783 Troap trophinin associated protein protein_coding Mus_musculus

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