C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135740 SLC9A5 9606 + 16:67237683-67272190 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299798 SLC9A5-001 67248950-67272190 protein_coding
  ENST00000561472 SLC9A5-009 67248979-67256478 processed_transcript
  ENST00000563723 SLC9A5-003 67248977-67272190 retained_intron
  ENST00000564704 SLC9A5-002 67237683-67272190 retained_intron
  ENST00000564812 SLC9A5-004 67248872-67272058 nonsense_mediated_decay
  ENST00000566345 SLC9A5-008 67246915-67259942 protein_coding
  ENST00000566626 SLC9A5-006 67252809-67270980 protein_coding
  ENST00000566638 SLC9A5-007 67249078-67265148 retained_intron
  ENST00000567247 SLC9A5-010 67252736-67265106 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartTestisENST00000299798ENST00000564704ENST00000564812ENST00000566626
Transcript ID Adrenal Brain Heart Testis
ENST00000299798 N/A 1.124±0.00 N/A N/A
ENST00000564704 1.736±0.00 0.842±0.00 0.514±0.00 N/A
ENST00000564812 N/A N/A N/A 3.206±0.00
ENST00000566626 N/A N/A N/A 7.615±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K2 CIL_0005K2_0001 CGP 16:67227103-67247658
CIL_0003M0 CIL_0003M0_0002 CGP 16:67229387-67272190
CIL_0005JZ CIL_0005JZ_0002 CGP 16:67237683-67289499

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006810 TAS transport
GO:0006811 TAS ion transport
GO:0006812 IEA cation transport
GO:0006814 IEA sodium ion transport
GO:0006885 IEA regulation of pH
GO:0015299 IEA solute:proton antiporter activity
GO:0015385 IEA sodium:proton antiporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078560 slc9a5 solute carrier family 9 (sodium/hydrogen exchanger), member 5 protein_coding Danio_rerio
ENSMUSG00000014786 Slc9a5 solute carrier family 9 (sodium/hydrogen exchanger), member 5 protein_coding Mus_musculus

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