C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135801 TAF5L 9606 - 1:229593111-229626047 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258281 TAF5L-201 229593121-229626047 protein_coding
  ENST00000366674 TAF5L-003 229614157-229626047 protein_coding
  ENST00000366675 TAF5L-002 229599194-229625970 protein_coding
  ENST00000366676 TAF5L-001 229593111-229614482 protein_coding
  ENST00000477957 TAF5L-004 229606834-229626038 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258281ENST00000366674ENST00000366675ENST00000366676
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258281 4.400±0.00 6.488±0.00 0.661±0.00 2.224±1.19 4.008±0.00 3.624±0.00 3.100±0.00 2.939±0.66 1.711±0.95 2.601±0.00 2.023±0.92 2.779±1.57 3.112±1.03 2.366±0.00
ENST00000366674 N/A N/A N/A N/A N/A N/A 0.945±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000366675 1.021±0.00 1.640±0.00 0.154±0.00 0.786±0.37 0.923±0.03 0.625±0.19 0.547±0.30 0.389±0.00 0.692±0.05 0.678±0.25 0.402±0.00 0.795±0.04 1.131±0.17 0.952±0.05
ENST00000366676 N/A N/A N/A 2.303±0.00 2.172±0.00 1.862±0.00 0.485±0.00 N/A 1.907±0.00 1.694±0.00 1.113±0.00 3.697±2.06 4.796±1.21 1.463±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005S7 CIL_0005S7_0001 CGP 1:229516582-229626047
CIL_0005S6 CIL_0005S6_0001 CGP 1:229593111-229660199

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003713 IDA transcription coactivator activity
GO:0004402 IDA histone acetyltransferase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006325 TAS chromatin organization
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0030914 IDA STAGA complex
GO:0033276 IDA transcription factor TFTC complex
GO:0043966 IDA histone H3 acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025808 taf5l TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor protein_coding Danio_rerio
ENSMUSG00000038697 Taf5l TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor protein_coding Mus_musculus

Loading