C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: G protein-coupled receptor 55
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135898 GPR55 9606 - 2:230907318-230961066 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000392039 GPR55-001 230909866-230961066 protein_coding
  ENST00000392040 GPR55-201 230907328-230925226 protein_coding
  ENST00000438398 GPR55-003 230910237-230925226 protein_coding
  ENST00000444078 GPR55-002 230907318-230925226 nonsense_mediated_decay
  ENST00000622008 GPR55-202 230907319-230925226 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000392039ENST00000392040ENST00000438398ENST00000444078ENST00000622008
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000392039 N/A N/A 0.295±0.00 0.345±0.00 1.059±0.00 N/A N/A N/A N/A N/A N/A
ENST00000392040 N/A 1.104±0.00 0.239±0.00 0.010±0.00 0.054±0.00 0.143±0.00 0.035±0.02 0.091±0.03 0.050±0.01 0.040±0.01 0.794±0.00
ENST00000438398 N/A N/A N/A N/A N/A 0.151±0.00 0.136±0.00 0.458±0.00 N/A N/A N/A
ENST00000444078 0.007±0.00 N/A N/A N/A N/A 0.011±0.00 N/A N/A 0.022±0.00 N/A N/A
ENST00000622008 0.007±0.00 N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.022±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076O CIL_00076O_0001 CGP 2:230907318-231025055

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004930 IEA:TAS G-protein coupled receptor activity
GO:0004949 IDA cannabinoid receptor activity
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0007186 IEA:TAS G-protein coupled receptor signaling pathway
GO:0007202 IDA activation of phospholipase C activity
GO:0016021 IEA integral component of membrane
GO:0035025 IDA positive regulation of Rho protein signal transduction
GO:0038171 IDA cannabinoid signaling pathway
GO:0045453 IDA bone resorption
GO:0045671 IDA negative regulation of osteoclast differentiation
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043447 gpr55a G protein-coupled receptor 55a protein_coding Danio_rerio
ENSMUSG00000049608 Gpr55 G protein-coupled receptor 55 protein_coding Mus_musculus

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