C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome c oxidase subunit Vb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135940 COX5B 9606 + 2:97646040-97648383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258424 COX5B-001 97646040-97648383 protein_coding
  ENST00000464949 COX5B-004 97646097-97648191 processed_transcript
  ENST00000491989 COX5B-002 97646289-97648179 processed_transcript
  ENST00000494306 COX5B-003 97646441-97647381 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258424ENST00000464949
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258424 9.781±0.00 15.174±0.00 30.788±0.00 74.108±48.25 24.833±4.03 45.657±28.40 107.618±14.43 52.424±22.42 27.314±3.65 18.718±3.07 126.374±70.18 120.078±53.92 148.870±50.56 38.801±22.47
ENST00000464949 93.808±0.00 143.170±0.00 N/A 217.600±0.00 176.945±0.00 161.993±0.00 351.254±0.00 246.241±0.00 132.281±0.00 107.607±0.00 232.037±0.00 N/A N/A 129.879±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002U7 CIL_0002U7_0001 CGP 2:97646040-97664107

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004129 IEA cytochrome-c oxidase activity
GO:0005739 IDA mitochondrion
GO:0005740 IEA mitochondrial envelope
GO:0005743 TAS mitochondrial inner membrane
GO:0007585 TAS respiratory gaseous exchange
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011208 COX5B (1 of 3) cytochrome c oxidase subunit Vb protein_coding Danio_rerio
ENSDARG00000015978 COX5B (2 of 3) cytochrome c oxidase subunit Vb protein_coding Danio_rerio
ENSDARG00000068738 cox5b2 cytochrome c oxidase subunit Vb 2 protein_coding Danio_rerio
ENSMUSG00000061518 Cox5b cytochrome c oxidase subunit Vb protein_coding Mus_musculus
ENSMUSG00000079941 Gm11273 predicted gene 11273 protein_coding Mus_musculus

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