C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002U7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135940-ENSG00000115073 CGP 9606 2:97646040-97664107
GeneTranscriptPositionBiotype
ENSG00000115073 (ACTR1B)
ARP1 actin-related protein 1 homolog B, centractin beta (yeast) 		ENST00000289228 (ACTR1B-001) 97655963-97664107 protein_coding
ENST00000451664 (ACTR1B-002) 97657978-97663916 retained_intron
ENST00000460427 (ACTR1B-003) 97658814-97659891 retained_intron
ENSG00000135940 (COX5B)
cytochrome c oxidase subunit Vb 		ENST00000258424 (COX5B-001) 97646040-97648383 protein_coding
ENST00000464949 (COX5B-004) 97646097-97648191 processed_transcript
ENST00000491989 (COX5B-002) 97646289-97648179 processed_transcript
ENST00000494306 (COX5B-003) 97646441-97647381 retained_intron
CIL_0002U7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061518-ENSMUSG00000037351 CGP 10090 1:36691487-36714422
GeneTranscriptPositionBiotype
ENSMUSG00000037351 (Actr1b)
ARP1 actin-related protein 1B, centractin beta 		ENSMUST00000043951 (Actr1b-001) 36698116-36710008 protein_coding
ENSMUST00000159448 (Actr1b-002) 36701763-36709678 protein_coding
ENSMUST00000159675 (Actr1b-005) 36701213-36701651 retained_intron
ENSMUST00000160043 (Actr1b-006) 36702482-36707167 retained_intron
ENSMUST00000160084 (Actr1b-007) 36701784-36714422 protein_coding
ENSMUST00000162662 (Actr1b-003) 36706548-36709919 processed_transcript
ENSMUST00000162684 (Actr1b-008) 36701672-36709947 retained_intron
ENSMUSG00000061518 (Cox5b)
cytochrome c oxidase subunit Vb 		ENSMUST00000081180 (Cox5b-201) 36691487-36693385 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U7_0001ENSG00000115073ENST00000289228ENST00000451664ENST00000460427ENSG00000135940ENST00000258424ENST00000464949ENST00000491989ENST00000494306CIL_0002U7_0002ENSMUSG00000037351ENSMUST00000043951ENSMUST00000159448ENSMUST00000159675ENSMUST00000160043ENSMUST00000160084ENSMUST00000162662ENSMUST00000162684ENSMUSG00000061518ENSMUST00000081180
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U7_0001ENSG00000115073ENST00000289228ENST00000451664ENSG00000135940ENST00000258424ENST00000464949CIL_0002U7_0002ENSMUSG00000037351ENSMUST00000043951ENSMUST00000159448ENSMUSG00000061518ENSMUST00000081180
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115073 ENST00000289228 21.014±0.00 23.630±0.00 1.501±0.00 29.369±18.07 12.212±11.20 13.549±11.20 11.847±10.15 16.934±12.21 10.379±6.59 6.695±5.47 16.367±9.67 23.418±11.60 17.929±6.24 15.573±8.85
ENST00000451664 N/A N/A N/A N/A 2.641±0.00 1.285±0.00 0.997±0.00 1.597±0.00 N/A N/A 2.760±0.00 27.360±24.12 18.327±0.00 15.521±0.00
ENST00000460427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135940 ENST00000258424 9.781±0.00 15.174±0.00 30.788±0.00 74.108±48.25 24.833±4.03 45.657±28.40 107.618±14.43 52.424±22.42 27.314±3.65 18.718±3.07 126.374±70.18 120.078±53.92 148.870±50.56 38.801±22.47
ENST00000464949 93.808±0.00 143.170±0.00 N/A 217.600±0.00 176.945±0.00 161.993±0.00 351.254±0.00 246.241±0.00 132.281±0.00 107.607±0.00 232.037±0.00 N/A N/A 129.879±0.00
ENST00000491989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037351 ENSMUST00000043951 43.090±1.87 85.892±1.03 42.962±4.81 54.071±12.84 40.503±15.29 94.916±5.23 32.816±2.63 57.673±4.73 25.665±6.95 49.522±3.50 39.335±2.32 53.793±25.09 25.432±5.24 12.829±5.83
ENSMUST00000159448 N/A N/A N/A N/A 20.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061518 ENSMUST00000081180 409.640±51.20 823.954±82.98 307.541±44.22 187.933±34.75 434.045±110.99 722.100±169.12 1337.520±282.07 1049.807±213.79 460.996±122.88 208.997±23.85 421.401±35.03 363.997±112.67 232.428±95.40 242.805±90.15

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