C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 2 open reading frame 49
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135974 C2orf49 9606 + 2:105337359-105349211 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258457 C2orf49-001 105337359-105349211 protein_coding
  ENST00000410049 C2orf49-002 105337532-105345596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258457ENST00000410049
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258457 1.422±0.00 1.363±0.00 0.926±0.00 1.579±0.94 2.120±0.18 1.274±0.45 1.032±0.35 1.187±0.04 1.069±0.34 0.533±0.00 0.956±0.39 3.033±1.38 1.811±0.37 2.264±1.13
ENST00000410049 2.519±0.00 2.197±0.00 1.265±0.00 3.108±0.64 1.258±0.00 2.651±1.65 2.938±1.38 1.699±0.00 1.936±0.57 3.128±0.00 3.044±1.62 5.887±2.72 4.035±1.87 8.830±3.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096O CIL_00096O_0001 VISTA 2:104780753-105381700
CIL_0003Y4 CIL_0003Y4_0001 CGP 2:105264391-105349211
CIL_00010E CIL_00010E_0001 CGP 2:105337359-105438513

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0048598 IEA embryonic morphogenesis
GO:0072669 IDA tRNA-splicing ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042025 C9H2orf49 chromosome 2 open reading frame 49 protein_coding Danio_rerio
ENSMUSG00000010290 AI597479 expressed sequence AI597479 protein_coding Mus_musculus

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