C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003Y4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135966-ENSG00000135974 CGP 9606 2:105264391-105349211
GeneTranscriptPositionBiotype
ENSG00000135966 (TGFBRAP1)
transforming growth factor, beta receptor associated protein 1 		ENST00000258449 (TGFBRAP1-201) 105267121-105308321 protein_coding
ENST00000393359 (TGFBRAP1-001) 105264414-105330034 protein_coding
ENST00000595531 (TGFBRAP1-202) 105264391-105308321 protein_coding
ENSG00000135974 (C2orf49)
chromosome 2 open reading frame 49 		ENST00000258457 (C2orf49-001) 105337359-105349211 protein_coding
ENST00000410049 (C2orf49-002) 105337532-105345596 protein_coding
ENSG00000235319 (AC012360.4)
 ENST00000433219 (AC012360.4-001) 105324210-105330529 lincRNA
ENSG00000272994 (RP11-332H14.2)
 ENST00000610036 (RP11-332H14.2-001) 105334027-105337475 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003Y4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070939-ENSMUSG00000010290 CGP 10090 1:43047200-43115947
GeneTranscriptPositionBiotype
ENSMUSG00000010290 (AI597479)
expressed sequence AI597479 		ENSMUST00000010434 (AI597479-001) 43098710-43115947 protein_coding
ENSMUSG00000070939 (Tgfbrap1)
transforming growth factor, beta receptor associated protein 1 		ENSMUST00000095014 (Tgfbrap1-001) 43047200-43098622 protein_coding
ENSMUST00000186694 (Tgfbrap1-003) 43047220-43092729 protein_coding
ENSMUST00000187525 (Tgfbrap1-005) 43074241-43092463 retained_intron
ENSMUST00000187872 (Tgfbrap1-002) 43074482-43098637 retained_intron
ENSMUST00000188598 (Tgfbrap1-006) 43054708-43060933 retained_intron
ENSMUST00000188728 (Tgfbrap1-008) 43059891-43092447 protein_coding
ENSMUST00000189010 (Tgfbrap1-007) 43075616-43098364 protein_coding
ENSMUST00000190427 (Tgfbrap1-004) 43071496-43098608 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Y4_0001ENSG00000135966ENST00000258449ENST00000393359ENST00000595531ENSG00000135974ENST00000258457ENST00000410049ENSG00000235319ENST00000433219ENSG00000272994ENST00000610036CIL_0003Y4_0002ENSMUSG00000010290ENSMUST00000010434ENSMUSG00000070939ENSMUST00000095014ENSMUST00000186694ENSMUST00000187525ENSMUST00000187872ENSMUST00000188598ENSMUST00000188728ENSMUST00000189010ENSMUST00000190427
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Y4_0001ENSG00000135966ENST00000258449ENST00000393359ENST00000595531ENSG00000135974ENST00000258457ENST00000410049ENSG00000235319ENST00000433219ENSG00000272994ENST00000610036CIL_0003Y4_0002ENSMUSG00000010290ENSMUST00000010434ENSMUSG00000070939ENSMUST00000095014ENSMUST00000186694ENSMUST00000187525ENSMUST00000188728
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135966 ENST00000258449 N/A N/A N/A N/A N/A 1.210±0.00 N/A N/A 2.753±0.00 N/A 1.661±0.00 4.855±0.41 4.279±0.00 N/A
ENST00000393359 3.573±0.00 N/A N/A 3.413±0.00 4.296±0.00 1.118±0.14 0.628±0.00 4.111±0.00 0.865±0.00 1.938±0.00 3.944±0.00 2.669±1.41 2.551±0.00 1.990±0.00
ENST00000595531 2.649±0.00 7.311±0.00 1.797±0.00 1.035±0.46 N/A 1.246±0.00 1.098±0.83 N/A 0.515±0.00 0.474±0.00 0.479±0.00 4.531±0.61 4.778±0.73 1.375±0.08
ENSG00000135974 ENST00000258457 1.422±0.00 1.363±0.00 0.926±0.00 1.579±0.94 2.120±0.18 1.274±0.45 1.032±0.35 1.187±0.04 1.069±0.34 0.533±0.00 0.956±0.39 3.033±1.38 1.811±0.37 2.264±1.13
ENST00000410049 2.519±0.00 2.197±0.00 1.265±0.00 3.108±0.64 1.258±0.00 2.651±1.65 2.938±1.38 1.699±0.00 1.936±0.57 3.128±0.00 3.044±1.62 5.887±2.72 4.035±1.87 8.830±3.03
ENSG00000235319 ENST00000433219 0.104±0.00 0.080±0.00 N/A N/A 0.354±0.00 N/A N/A N/A N/A N/A N/A 0.094±0.05 N/A 0.124±0.00
ENSG00000272994 ENST00000610036 N/A N/A 0.252±0.00 N/A 0.329±0.00 0.381±0.00 0.180±0.00 0.533±0.19 N/A N/A N/A 0.988±0.15 N/A 1.578±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010290 ENSMUST00000010434 5.524±0.74 3.160±0.92 11.017±1.88 8.920±6.01 3.104±0.81 3.877±0.34 5.004±0.52 3.354±0.28 3.417±1.03 6.067±0.59 5.398±0.41 7.170±1.72 5.007±1.23 6.181±2.13
ENSMUSG00000070939 ENSMUST00000095014 2.101±0.14 9.385±2.62 2.036±0.39 2.441±0.90 3.089±1.56 2.759±0.92 0.864±0.12 2.276±0.34 1.538±1.27 3.230±0.65 0.619±0.15 4.490±1.99 1.984±0.86 1.773±0.84
ENSMUST00000186694 11.105±1.17 2.302±0.00 5.331±0.82 3.588±0.33 4.672±1.28 5.023±1.32 3.048±0.30 12.237±1.57 3.693±2.20 10.349±1.81 3.441±0.59 4.483±0.69 3.690±0.61 1.023±0.31
ENSMUST00000187525 N/A N/A N/A N/A N/A 4.996±0.34 N/A N/A 4.485±0.00 N/A N/A 9.764±0.50 N/A N/A
ENSMUST00000187872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.605±0.00
ENSMUST00000189010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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