C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine-rich repeats and calponin homology (CH) domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136141 LRCH1 9606 + 13:46553168-46753040 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311191 LRCH1-002 46553168-46753040 protein_coding
  ENST00000389797 LRCH1-004 46553260-46742733 protein_coding
  ENST00000389798 LRCH1-001 46553200-46743595 protein_coding
  ENST00000443945 LRCH1-003 46553170-46705620 retained_intron
  ENST00000463929 LRCH1-005 46679836-46692577 protein_coding
  ENST00000478412 LRCH1-006 46680034-46689161 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311191ENST00000389798ENST00000463929
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311191 8.066±0.00 5.443±0.00 N/A 0.600±0.42 2.195±0.97 4.508±0.00 3.493±0.00 3.527±0.00 1.047±0.53 7.553±0.00 1.237±0.00 5.733±1.29 9.223±3.02 4.562±0.66
ENST00000389798 N/A N/A 0.678±0.00 0.352±0.00 0.956±0.00 N/A 0.385±0.00 N/A N/A 1.851±0.00 0.567±0.00 2.647±0.00 N/A N/A
ENST00000463929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.154±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021P CIL_00021P_0002 CGP 13:46342000-46753040
CIL_00021N CIL_00021N_0002 CGP 13:46553168-46797232

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078778 LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 protein_coding Danio_rerio
ENSMUSG00000068015 Lrch1 leucine-rich repeats and calponin homology (CH) domain containing 1 protein_coding Mus_musculus

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