C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00021P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088402-ENSDARG00000078778 CGP 7955 9:26116505-26203386
GeneTranscriptPositionBiotype
ENSDARG00000078778 (LRCH1)
leucine-rich repeats and calponin homology (CH) domain containing 1 		ENSDART00000108629 (LRCH1-201) 26129981-26203386 protein_coding
ENSDART00000135074 (LRCH1-001) 26129845-26200447 protein_coding
ENSDARG00000088402 (si:ch211-260b17.6)
si:ch211-260b17.6 		ENSDART00000132160 (si:ch211-260b17.6-002) 26124978-26127526 protein_coding
ENSDART00000143479 (si:ch211-260b17.6-001) 26116505-26122881 protein_coding
CIL_00021P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102445-ENSG00000136141 CGP 9606 13:46342000-46753040
GeneTranscriptPositionBiotype
ENSG00000102445 (KIAA0226L)
KIAA0226-like 		ENST00000378781 (KIAA0226L-201) 46342000-46387500 protein_coding
ENST00000378784 (KIAA0226L-006) 46342964-46387233 protein_coding
ENST00000378787 (KIAA0226L-001) 46342964-46387486 protein_coding
ENST00000378797 (KIAA0226L-202) 46342000-46387500 protein_coding
ENST00000389908 (KIAA0226L-005) 46342001-46390042 protein_coding
ENST00000409879 (KIAA0226L-012) 46342967-46438190 protein_coding
ENST00000417405 (KIAA0226L-007) 46368074-46387230 protein_coding
ENST00000429979 (KIAA0226L-203) 46342000-46387500 protein_coding
ENST00000439642 (KIAA0226L-008) 46371941-46378645 protein_coding
ENST00000441284 (KIAA0226L-003) 46342964-46387235 nonsense_mediated_decay
ENST00000480935 (KIAA0226L-009) 46372053-46387232 processed_transcript
ENST00000487195 (KIAA0226L-010) 46342964-46351007 retained_intron
ENSG00000136141 (LRCH1)
leucine-rich repeats and calponin homology (CH) domain containing 1 		ENST00000311191 (LRCH1-002) 46553168-46753040 protein_coding
ENST00000389797 (LRCH1-004) 46553260-46742733 protein_coding
ENST00000389798 (LRCH1-001) 46553200-46743595 protein_coding
ENST00000443945 (LRCH1-003) 46553170-46705620 retained_intron
ENST00000463929 (LRCH1-005) 46679836-46692577 protein_coding
ENST00000478412 (LRCH1-006) 46680034-46689161 protein_coding
ENSG00000205105 (COX17P1)
COX17 cytochrome c oxidase copper chaperone pseudogene 1 		ENST00000378775 (COX17P1-001) 46490930-46491121 processed_pseudogene
ENSG00000223336 (RNU2-6P)
RNA, U2 small nuclear 6, pseudogene 		ENST00000411404 (RNU2-6P-201) 46374401-46374590 snRNA
ENSG00000227019 (OR7E101P)
olfactory receptor, family 7, subfamily E, member 101 pseudogene 		ENST00000400428 (OR7E101P-001) 46460609-46461121 unprocessed_pseudogene
ENSG00000230243 (FKBP1AP3)
FK506 binding protein 1A, 12kDa pseudogene 3 		ENST00000423650 (FKBP1AP3-001) 46505118-46505436 processed_pseudogene
ENSG00000231817 (LINC01198)
long intergenic non-protein coding RNA 1198 		ENST00000416521 (LINC01198-002) 46455337-46466783 lincRNA
ENST00000458282 (LINC01198-001) 46455353-46458238 lincRNA
ENST00000593640 (LINC01198-008) 46455369-46464819 lincRNA
ENST00000594153 (LINC01198-003) 46460945-46466776 lincRNA
ENST00000594428 (LINC01198-004) 46460945-46466006 lincRNA
ENST00000595532 (LINC01198-005) 46458061-46459185 lincRNA
ENST00000598084 (LINC01198-009) 46455135-46486506 lincRNA
ENST00000599175 (LINC01198-007) 46455369-46466686 lincRNA
ENSG00000241353 (PPP1R2P4)
protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 4 		ENST00000424051 (PPP1R2P4-001) 46437394-46437988 processed_pseudogene
ENSG00000278462 (RP11-165D6.1)
 ENST00000621879 (RP11-165D6.1-001) 46717423-46717688 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021P_0001ENSDARG00000078778ENSDART00000108629ENSDART00000135074ENSDARG00000088402ENSDART00000132160ENSDART00000143479CIL_00021P_0002ENSG00000102445ENST00000378781ENST00000378784ENST00000378787ENST00000378797ENST00000389908ENST00000409879ENST00000417405ENST00000429979ENST00000439642ENST00000441284ENST00000480935ENST00000487195ENSG00000136141ENST00000311191ENST00000389797ENST00000389798ENST00000443945ENST00000463929ENST00000478412ENSG00000205105ENST00000378775ENSG00000223336ENST00000411404ENSG00000227019ENST00000400428ENSG00000230243ENST00000423650ENSG00000231817ENST00000416521ENST00000458282ENST00000593640ENST00000594153ENST00000594428ENST00000595532ENST00000598084ENST00000599175ENSG00000241353ENST00000424051ENSG00000278462ENST00000621879
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021P_0001ENSDARG00000078778ENSDART00000108629ENSDART00000135074ENSDARG00000088402ENSDART00000132160ENSDART00000143479CIL_00021P_0002ENSG00000102445ENST00000378781ENST00000378784ENST00000378787ENST00000378797ENST00000389908ENST00000409879ENST00000417405ENST00000439642ENST00000441284ENST00000487195ENSG00000136141ENST00000311191ENST00000389798ENST00000463929ENSG00000205105ENST00000378775ENSG00000223336ENST00000411404ENSG00000227019ENST00000400428ENSG00000230243ENST00000423650ENSG00000231817ENST00000416521ENST00000593640ENST00000594153ENST00000595532ENST00000598084ENST00000599175ENSG00000241353ENST00000424051ENSG00000278462ENST00000621879
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000078778 ENSDART00000108629 N/A N/A N/A 2.120±1.66 N/A N/A 12.200±2.77 2.314±1.40 0.181±0.00 N/A N/A N/A N/A N/A
ENSDART00000135074 N/A N/A N/A 6.186±0.00 N/A N/A 2.481±0.00 0.579±0.00 0.124±0.00 N/A N/A N/A N/A N/A
ENSDARG00000088402 ENSDART00000132160 N/A N/A N/A 0.135±0.02 N/A N/A 0.499±0.18 0.756±0.00 0.066±0.00 N/A 0.100±0.00 N/A N/A N/A
ENSDART00000143479 N/A N/A N/A 0.125±0.03 N/A N/A 0.945±0.13 0.836±0.00 N/A N/A 0.087±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102445 ENST00000378781 N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000378784 0.167±0.00 7.071±0.00 N/A 0.256±0.07 0.474±0.00 0.566±0.00 0.050±0.00 0.172±0.11 0.170±0.00 1.203±0.00 N/A 0.317±0.08 0.707±0.07 2.582±0.00
ENST00000378787 0.235±0.00 N/A 0.045±0.00 0.247±0.00 N/A N/A N/A N/A N/A 0.812±0.38 N/A N/A 0.447±0.11 N/A
ENST00000378797 N/A N/A N/A N/A N/A 0.365±0.00 0.018±0.00 N/A N/A N/A N/A N/A 0.852±0.00 N/A
ENST00000389908 N/A N/A N/A 0.188±0.00 0.183±0.00 N/A N/A N/A 0.116±0.00 N/A N/A 0.223±0.00 0.223±0.00 1.812±0.00
ENST00000409879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.185±1.62
ENST00000417405 N/A N/A N/A N/A 1.317±0.00 N/A 0.074±0.00 0.103±0.00 N/A N/A N/A N/A N/A N/A
ENST00000429979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439642 N/A N/A 0.231±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.661±0.00 N/A N/A
ENST00000441284 0.111±0.00 N/A N/A 0.257±0.00 0.122±0.00 N/A 0.060±0.00 N/A N/A N/A N/A 0.155±0.06 0.466±0.01 1.498±0.44
ENST00000480935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487195 N/A 2.745±0.00 N/A 0.228±0.00 N/A 0.205±0.00 0.043±0.00 N/A N/A N/A N/A 0.285±0.10 N/A 4.038±0.00
ENSG00000136141 ENST00000311191 8.066±0.00 5.443±0.00 N/A 0.600±0.42 2.195±0.97 4.508±0.00 3.493±0.00 3.527±0.00 1.047±0.53 7.553±0.00 1.237±0.00 5.733±1.29 9.223±3.02 4.562±0.66
ENST00000389797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389798 N/A N/A 0.678±0.00 0.352±0.00 0.956±0.00 N/A 0.385±0.00 N/A N/A 1.851±0.00 0.567±0.00 2.647±0.00 N/A N/A
ENST00000443945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.154±0.00 N/A N/A N/A
ENST00000478412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205105 ENST00000378775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A
ENSG00000223336 ENST00000411404 N/A 0.808±0.00 1.672±0.00 5.057±0.00 8.293±0.00 1.036±0.00 5.149±0.00 0.811±0.59 9.589±0.00 9.995±0.00 N/A 10.775±0.00 N/A 0.231±0.00
ENSG00000227019 ENST00000400428 N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.432±0.00
ENSG00000230243 ENST00000423650 N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231817 ENST00000416521 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A 1.647±0.00
ENST00000458282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.330±0.00
ENST00000594153 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.150±0.00 N/A N/A
ENST00000594428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595532 N/A 0.023±0.00 N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598084 N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A 1.525±0.00
ENST00000599175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.524±1.55
ENSG00000241353 ENST00000424051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A
ENSG00000278462 ENST00000621879 N/A N/A 4.139±0.00 N/A 3.540±0.00 0.899±0.00 0.312±0.00 N/A 0.610±0.00 3.015±0.00 N/A 3.271±4.35 N/A 0.211±0.03

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