C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell death-inducing DFFA-like effector b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136305 CIDEB 9606 - 14:24305096-24311430 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258807 CIDEB-001 24305187-24311422 protein_coding
  ENST00000336557 CIDEB-002 24305187-24311395 protein_coding
  ENST00000554411 CIDEB-003 24305096-24308263 protein_coding
  ENST00000555471 CIDEB-005 24310087-24310718 retained_intron
  ENST00000555817 CIDEB-006 24310799-24311430 processed_transcript
  ENST00000556756 CIDEB-004 24305606-24306461 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258807ENST00000554411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258807 N/A 7.942±0.00 N/A N/A 6.491±0.00 5.205±0.00 4.462±0.00 18.752±0.00 52.546±0.00 5.431±0.00 N/A 6.346±3.92 3.055±0.00 5.591±0.00
ENST00000554411 16.231±0.00 16.275±0.00 3.669±0.00 9.047±4.87 6.800±3.34 6.055±2.91 4.718±3.32 29.678±6.01 49.905±46.68 5.243±1.56 10.252±8.13 12.884±6.81 8.806±2.57 11.396±1.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CE CIL_0002CE_0001 CGP 14:24290598-24309124
CIL_0002D8 CIL_0002D8_0001 CGP 14:24299862-24311430
CIL_0004O5 CIL_0004O5_0001 CGP 14:24305096-24312053

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005811 IBA lipid particle
GO:0005829 IDA cytosol
GO:0006915 IDA:IEA apoptotic process
GO:0008630 TAS intrinsic apoptotic signaling pathway in response to DNA damage
GO:0042802 IPI identical protein binding
GO:0042981 IBA regulation of apoptotic process
GO:0097194 ISS execution phase of apoptosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012640 cideb cell death-inducing DFFA-like effector b protein_coding Danio_rerio
ENSMUSG00000022219 Cideb cell death-inducing DNA fragmentation factor, alpha subunit-like effector B protein_coding Mus_musculus

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