C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell death-inducing DFFA-like effector b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554411 CIDEB-003 ENSG00000136305 9606 - 14:24305096-24308263 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000554411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000554411 16.231±0.00 16.275±0.00 3.669±0.00 9.047±4.87 6.800±3.34 6.055±2.91 4.718±3.32 29.678±6.01 49.905±46.68 5.243±1.56 10.252±8.13 12.884±6.81 8.806±2.57 11.396±1.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CE CIL_0002CE_0001 CGP 14:24290598-24309124
CIL_0002D8 CIL_0002D8_0001 CGP 14:24299862-24311430
CIL_0004O5 CIL_0004O5_0001 CGP 14:24305096-24312053

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005811 IBA lipid particle
GO:0005829 IDA cytosol
GO:0006915 IDA:IEA apoptotic process
GO:0008630 TAS intrinsic apoptotic signaling pathway in response to DNA damage
GO:0042802 IPI identical protein binding
GO:0042981 IBA regulation of apoptotic process
GO:0097194 ISS execution phase of apoptosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001497 Cideb-001 protein_coding Mus_musculus 0 658
ENSMUST00000136270 Cideb-002 retained_intron Mus_musculus 0 316
ENSMUST00000019441 Nop9-001 protein_coding Mus_musculus 2e-36 158

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