C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heparan sulfate 6-O-sulfotransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136720 HS6ST1 9606 - 2:128236716-128318577 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259241 HS6ST1-001 128265480-128318577 protein_coding
  ENST00000463963 HS6ST1-004 128268690-128290196 processed_transcript
  ENST00000469019 HS6ST1-003 128236716-128318396 processed_transcript
  ENST00000494089 HS6ST1-002 128289645-128318472 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259241ENST00000469019
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259241 6.294±0.00 8.244±0.00 1.477±0.00 15.994±13.75 4.909±3.84 6.015±4.66 5.768±5.21 15.902±12.82 8.821±7.96 4.163±3.15 7.246±3.82 16.214±8.24 16.318±3.29 13.694±3.08
ENST00000469019 N/A N/A N/A N/A N/A N/A N/A N/A 2.069±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WO CIL_0002WO_0002 CGP 2:128091200-128318577

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001525 IEA angiogenesis
GO:0005887 TAS integral component of plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0008146 TAS:IEA sulfotransferase activity
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015015 IEA heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016021 IEA integral component of membrane
GO:0017095 IEA heparan sulfate 6-O-sulfotransferase activity
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048286 IEA lung alveolus development
GO:0048666 IMP neuron development
GO:0060716 IEA labyrinthine layer blood vessel development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054754 hs6st1a heparan sulfate 6-O-sulfotransferase 1a protein_coding Danio_rerio
ENSDARG00000088426 CU929314.1 heparan sulfate 6-O-sulfotransferase 1 protein_coding Danio_rerio
ENSMUSG00000045216 Hs6st1 heparan sulfate 6-O-sulfotransferase 1 protein_coding Mus_musculus

Loading