C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ral GEF with PH domain and SH3 binding motif 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136828 RALGPS1 9606 + 9:126914774-127223166 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259351 RALGPS1-001 126914774-127223164 protein_coding
  ENST00000319107 RALGPS1-009 126914827-127069355 protein_coding
  ENST00000373434 RALGPS1-002 126962225-127217812 protein_coding
  ENST00000373436 RALGPS1-007 126914851-127178426 protein_coding
  ENST00000373439 RALGPS1-008 126914790-127070000 retained_intron
  ENST00000394011 RALGPS1-012 126914806-126990223 protein_coding
  ENST00000394022 RALGPS1-006 126914786-127184336 protein_coding
  ENST00000424082 RALGPS1-201 126914774-127217445 protein_coding
  ENST00000438723 RALGPS1-005 127210745-127223166 protein_coding
  ENST00000467325 RALGPS1-003 127210503-127212967 processed_transcript
  ENST00000471643 RALGPS1-004 127212676-127217344 processed_transcript
  ENST00000472427 RALGPS1-010 126914832-127016961 processed_transcript
  ENST00000477700 RALGPS1-011 127050056-127079853 processed_transcript
  ENST00000480993 RALGPS1-013 126915450-126978306 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259351ENST00000319107ENST00000373434ENST00000424082ENST00000438723ENST00000471643ENST00000477700
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259351 0.134±0.00 0.324±0.00 2.222±0.67 0.117±0.00 0.228±0.00 0.812±0.59 0.877±0.70 N/A 0.564±0.00 0.081±0.00 0.490±0.21 0.537±0.00 3.655±0.84
ENST00000319107 N/A N/A N/A 1.355±0.00 4.206±0.00 N/A N/A 1.310±0.00 N/A N/A N/A N/A N/A
ENST00000373434 0.254±0.00 0.728±0.00 1.711±0.00 N/A 1.026±0.00 1.234±0.00 1.070±0.00 N/A 0.978±0.00 N/A 0.550±0.00 N/A N/A
ENST00000424082 N/A N/A N/A 0.447±0.00 N/A 0.226±0.00 N/A 0.334±0.00 N/A N/A N/A 0.377±0.00 N/A
ENST00000438723 0.138±0.00 1.144±0.00 2.447±0.00 0.344±0.09 0.793±0.10 N/A 1.616±0.00 0.065±0.00 0.699±0.00 0.386±0.00 0.695±0.12 0.922±0.13 N/A
ENST00000471643 N/A N/A N/A N/A N/A N/A N/A 0.417±0.00 N/A 0.855±0.00 N/A N/A N/A
ENST00000477700 0.872±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075D CIL_00075D_0001 CGP 9:126914774-127223166

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 NAS:IEA guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008321 IDA Ral guanyl-nucleotide exchange factor activity
GO:0032485 IDA regulation of Ral protein signal transduction
GO:0032852 IDA positive regulation of Ral GTPase activity
GO:0035556 NAS intracellular signal transduction
GO:0043547 NAS positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068370 ralgps1 Ral GEF with PH domain and SH3 binding motif 1 protein_coding Danio_rerio
ENSMUSG00000038831 Ralgps1 Ral GEF with PH domain and SH3 binding motif 1 protein_coding Mus_musculus

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