C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ral GEF with PH domain and SH3 binding motif 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038831 Ralgps1 10090 - 2:33133421-33371486 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042615 Ralgps1-001 33133421-33371481 protein_coding
  ENSMUST00000091039 Ralgps1-002 33136973-33371478 protein_coding
  ENSMUST00000113164 Ralgps1-003 33259364-33371470 protein_coding
  ENSMUST00000113165 Ralgps1-004 33133421-33371486 protein_coding
  ENSMUST00000131298 Ralgps1-005 33137636-33168222 protein_coding
  ENSMUST00000138704 Ralgps1-006 33143307-33158170 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000042615ENSMUST00000091039ENSMUST00000113165
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000042615 N/A N/A 11.223±6.31 0.559±0.07 0.676±0.15 0.247±0.00 N/A N/A 0.630±0.00 1.264±0.00 1.594±1.10 2.578±0.00
ENSMUST00000091039 N/A 0.855±0.00 4.421±0.00 0.961±0.00 0.930±0.20 0.534±0.00 N/A 0.769±0.00 0.719±0.00 1.016±0.26 N/A 12.424±4.03
ENSMUST00000113165 0.421±0.00 N/A 16.697±0.00 N/A N/A N/A 0.350±0.00 0.182±0.05 0.331±0.00 0.709±0.17 0.551±0.06 1.971±1.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_00075D CIL_00075D_0002 CGP 2:33133421-33371486

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008321 IEA Ral guanyl-nucleotide exchange factor activity
GO:0032485 IEA regulation of Ral protein signal transduction
GO:0032852 IEA positive regulation of Ral GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068370 ralgps1 Ral GEF with PH domain and SH3 binding motif 1 protein_coding Danio_rerio
ENSG00000136828 RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 protein_coding Homo_sapiens

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