C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 189
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136870 ZNF189 9606 + 9:101398873-101410660 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259395 ZNF189-003 101399028-101410660 protein_coding
  ENST00000339664 ZNF189-001 101399028-101410660 protein_coding
  ENST00000374861 ZNF189-002 101398873-101410660 protein_coding
  ENST00000615466 ZNF189-201 101399089-101409937 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259395ENST00000339664ENST00000374861
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259395 N/A N/A N/A 2.108±0.00 N/A 0.782±0.00 1.261±0.95 1.272±0.96 0.540±0.11 0.950±0.01 1.062±0.00 1.062±0.49 0.645±0.10 3.327±1.15
ENST00000339664 0.445±0.00 0.992±0.00 N/A 1.902±0.00 1.807±0.00 0.906±0.00 1.706±1.18 1.065±0.00 0.392±0.00 1.077±0.03 0.790±0.00 1.316±0.55 0.625±0.38 1.509±0.00
ENST00000374861 2.238±0.00 1.714±0.00 1.549±0.00 3.245±0.58 2.537±1.00 1.719±0.86 2.846±1.35 1.874±0.81 1.369±0.00 0.712±0.25 0.617±0.00 2.683±1.48 1.041±0.36 3.203±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZX CIL_0001ZX_0001 CGP 9:101387633-101410660
CIL_0001ZW CIL_0001ZW_0001 CGP 9:101398873-101435823

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076108 zgc:194336 zgc:194336 protein_coding Danio_rerio
ENSDARG00000088352 si:ch211-271g18.3 si:ch211-271g18.3 protein_coding Danio_rerio
ENSDARG00000089537 CABZ01079304.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090942 CABZ01054394.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093134 CR388165.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000096851 si:dkey-111k8.6 si:dkey-111k8.6 protein_coding Danio_rerio
ENSMUSG00000039634 Zfp189 zinc finger protein 189 protein_coding Mus_musculus

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