C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rab9 effector protein with kelch motifs
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136933 RABEPK 9606 + 9:125200542-125234158 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259460 RABEPK-201 125200542-125234158 protein_coding
  ENST00000373538 RABEPK-001 125200603-125234055 protein_coding
  ENST00000373544 RABEPK-002 125200545-125222387 protein_coding
  ENST00000394125 RABEPK-202 125200542-125234158 protein_coding
  ENST00000416065 RABEPK-003 125200605-125220658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259460ENST00000373538ENST00000373544ENST00000394125ENST00000416065
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259460 N/A 1.673±0.00 N/A 1.803±1.16 N/A 1.428±0.00 0.172±0.00 N/A N/A N/A N/A 3.786±2.52 3.932±0.00 1.590±0.00
ENST00000373538 7.853±0.00 9.315±0.00 0.095±0.00 10.137±0.00 7.667±5.89 9.023±0.00 3.251±0.00 3.324±0.00 7.087±0.00 3.199±0.00 4.644±0.00 6.456±4.10 5.842±3.11 6.369±3.97
ENST00000373544 N/A 0.649±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394125 N/A N/A N/A 2.455±0.00 0.732±0.00 2.319±0.00 0.642±0.00 3.439±0.00 0.988±0.00 2.175±0.00 1.383±0.00 2.890±1.20 4.089±0.00 N/A
ENST00000416065 N/A N/A 0.878±0.00 2.993±0.00 N/A N/A N/A 5.050±0.00 1.356±0.00 N/A N/A 1.949±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C6 CIL_0002C6_0002 CGP 9:125200542-125241330

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005768 IEA endosome
GO:0005886 IDA plasma membrane
GO:0006898 TAS receptor-mediated endocytosis
GO:0006904 TAS vesicle docking involved in exocytosis
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039840 rabepk Rab9 effector protein with kelch motifs protein_coding Danio_rerio
ENSMUSG00000070953 Rabepk Rab9 effector protein with kelch motifs protein_coding Mus_musculus

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