C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rab9 effector protein with kelch motifs
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070953 Rabepk 10090 - 2:34777556-34799912 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047963 Rabepk-007 34779428-34795305 nonsense_mediated_decay
  ENSMUST00000113086 Rabepk-002 34779217-34799618 protein_coding
  ENSMUST00000118108 Rabepk-006 34779237-34799728 protein_coding
  ENSMUST00000140663 Rabepk-004 34785031-34799901 nonsense_mediated_decay
  ENSMUST00000141099 Rabepk-005 34784639-34799864 nonsense_mediated_decay
  ENSMUST00000144113 Rabepk-003 34785503-34799754 retained_intron
  ENSMUST00000145903 Rabepk-001 34777556-34799912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047963ENSMUST00000113086ENSMUST00000118108ENSMUST00000141099ENSMUST00000144113ENSMUST00000145903
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047963 5.441±0.00 6.296±1.02 2.668±0.00 4.903±0.00 5.371±0.72 6.763±1.31 1.861±0.46 3.373±0.30 3.277±2.38 4.338±1.61 1.203±0.07 7.989±2.71 4.656±0.88 45.184±1.73
ENSMUST00000113086 N/A 2.187±0.00 1.507±0.00 N/A 3.838±0.00 N/A 1.631±0.00 N/A 0.810±0.00 N/A N/A 4.778±0.47 2.539±0.11 13.649±0.00
ENSMUST00000118108 8.493±1.36 3.230±1.46 2.731±0.67 4.071±1.59 4.103±1.73 3.508±1.64 2.400±0.72 4.200±0.86 3.696±1.86 2.763±0.43 2.277±0.53 5.259±1.28 4.316±2.01 63.579±34.95
ENSMUST00000141099 N/A 3.395±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144113 5.701±0.00 N/A N/A N/A N/A 4.128±0.79 2.712±0.58 N/A 3.262±1.70 N/A 1.933±0.00 6.366±0.00 6.649±0.45 N/A
ENSMUST00000145903 1.954±0.43 3.525±1.30 1.136±0.11 1.410±0.00 1.498±0.30 2.163±0.42 0.831±0.12 1.370±0.33 1.269±0.67 1.264±0.28 0.508±0.18 1.913±0.81 0.878±0.44 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039840 rabepk Rab9 effector protein with kelch motifs protein_coding Danio_rerio
ENSG00000136933 RABEPK Rab9 effector protein with kelch motifs protein_coding Homo_sapiens

Loading