C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: piggyBac transposable element derived 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137338 PGBD1 9606 + 6:28281572-28302549 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259883 PGBD1-001 28281572-28302549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259883
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259883 1.132±0.00 2.624±0.00 2.132±0.00 1.042±0.24 0.716±0.00 0.784±0.00 0.771±0.34 0.539±0.40 0.524±0.00 0.242±0.00 1.168±1.24 0.793±0.16 2.602±0.78

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005044 IEA scavenger receptor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094813 PGBD1 piggyBac transposable element derived 1 protein_coding Danio_rerio
ENSMUSG00000055313 Pgbd1 piggyBac transposable element derived 1 protein_coding Mus_musculus

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