C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar and spindle associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137804 NUSAP1 9606 + 15:41332694-41381050 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260359 NUSAP1-002 41332694-41381050 protein_coding
  ENST00000414849 NUSAP1-001 41332871-41381050 protein_coding
  ENST00000450592 NUSAP1-005 41332871-41380263 protein_coding
  ENST00000557840 NUSAP1-010 41342396-41375751 nonsense_mediated_decay
  ENST00000558123 NUSAP1-003 41332694-41380747 processed_transcript
  ENST00000558582 NUSAP1-012 41332883-41351986 processed_transcript
  ENST00000559046 NUSAP1-013 41332855-41351086 nonsense_mediated_decay
  ENST00000559596 NUSAP1-006 41332871-41380402 protein_coding
  ENST00000559659 NUSAP1-009 41332899-41349405 retained_intron
  ENST00000560177 NUSAP1-007 41332913-41381050 protein_coding
  ENST00000560318 NUSAP1-014 41365747-41377288 retained_intron
  ENST00000560747 NUSAP1-008 41332886-41381050 protein_coding
  ENST00000560898 NUSAP1-011 41351102-41377272 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260359ENST00000414849ENST00000557840ENST00000558123ENST00000558582ENST00000559046ENST00000559596ENST00000559659ENST00000560177ENST00000560318ENST00000560747ENST00000560898
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260359 N/A N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A 1.365±0.68 1.661±0.00 2.068±0.00
ENST00000414849 N/A N/A N/A N/A 1.197±0.00 2.770±0.00 N/A N/A N/A 0.613±0.00 N/A 4.040±2.46 3.664±1.85 3.957±1.24
ENST00000557840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.479±0.00 N/A N/A N/A
ENST00000558123 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.453±0.00 N/A N/A N/A
ENST00000558582 N/A N/A 0.352±0.00 N/A N/A 2.278±0.00 N/A N/A N/A N/A 0.618±0.00 N/A N/A N/A
ENST00000559046 N/A 1.237±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559596 N/A N/A 0.263±0.00 0.294±0.00 1.880±0.00 1.045±0.00 0.131±0.00 0.330±0.00 N/A 0.871±0.00 N/A 2.600±0.00 1.196±0.00 2.280±0.00
ENST00000559659 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.831±0.00 N/A N/A N/A N/A
ENST00000560177 N/A N/A N/A N/A 0.403±0.00 N/A N/A N/A 0.068±0.00 N/A N/A 1.361±0.00 1.284±0.54 N/A
ENST00000560318 1.221±0.00 0.964±0.00 N/A N/A N/A N/A 0.475±0.00 2.286±0.00 N/A N/A N/A N/A N/A N/A
ENST00000560747 N/A N/A N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560898 0.729±0.00 1.337±0.00 N/A 0.219±0.00 0.769±0.00 N/A N/A N/A N/A N/A 0.450±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005F9 CIL_0005F9_0001 CGP 15:41309268-41381050
CIL_0005FA CIL_0005FA_0001 CGP 15:41332694-41402519

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000070 IDA mitotic sister chromatid segregation
GO:0000281 IDA mitotic cytokinesis
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005819 IEA spindle
GO:0005874 IEA microtubule
GO:0005876 IEA spindle microtubule
GO:0007076 IDA mitotic chromosome condensation
GO:0008017 IEA microtubule binding
GO:0040001 IDA establishment of mitotic spindle localization
GO:0044822 IDA poly(A) RNA binding
GO:0045840 IDA positive regulation of mitosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002403 nusap1 nucleolar and spindle associated protein 1 protein_coding Danio_rerio
ENSMUSG00000027306 Nusap1 nucleolar and spindle associated protein 1 protein_coding Mus_musculus

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