C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: breast cancer anti-estrogen resistance 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137936 BCAR3 9606 - 1:93561786-93847150 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260502 BCAR3-001 93561791-93681829 protein_coding
  ENST00000370243 BCAR3-002 93561794-93681370 protein_coding
  ENST00000370244 BCAR3-003 93561791-93847150 protein_coding
  ENST00000370247 BCAR3-004 93561786-93614097 protein_coding
  ENST00000466632 BCAR3-006 93582301-93585101 processed_transcript
  ENST00000469315 BCAR3-009 93720189-93845712 processed_transcript
  ENST00000479503 BCAR3-008 93592306-93648822 processed_transcript
  ENST00000490377 BCAR3-007 93589083-93590378 processed_transcript
  ENST00000538653 BCAR3-005 93562121-93568127 retained_intron
  ENST00000539242 BCAR3-201 93561787-93585082 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260502ENST00000370243ENST00000370244ENST00000370247ENST00000466632ENST00000538653ENST00000539242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260502 6.901±0.00 7.035±0.00 N/A 1.356±1.02 3.296±2.59 2.657±1.81 1.238±0.90 7.863±0.00 1.107±0.00 6.775±0.00 1.899±0.00 2.721±2.33 9.379±0.48 1.559±0.10
ENST00000370243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.604±0.00 0.687±0.00 N/A N/A
ENST00000370244 N/A N/A N/A 0.884±0.00 N/A N/A 0.368±0.19 N/A N/A N/A N/A 0.952±0.00 N/A 1.014±0.28
ENST00000370247 N/A N/A 0.297±0.00 N/A 1.832±0.60 N/A 0.489±0.29 1.979±0.90 1.514±0.00 N/A 9.755±0.00 N/A N/A 0.988±0.00
ENST00000466632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.710±0.00 N/A N/A N/A
ENST00000538653 N/A N/A 1.165±0.00 N/A N/A 2.728±0.00 N/A N/A N/A 1.835±0.00 1.299±0.00 N/A N/A N/A
ENST00000539242 N/A 4.474±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.102±0.00 6.986±0.00 1.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C6 CIL_0007C6_0002 CGP 1:93448131-93847150
CIL_0009DH CIL_0009DH_0001 VISTA 1:93546220-94147690

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002089 IEA lens morphogenesis in camera-type eye
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0007165 TAS signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0033138 IEA positive regulation of peptidyl-serine phosphorylation
GO:0042493 TAS response to drug
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016981 bcar3 breast cancer anti-estrogen resistance 3 protein_coding Danio_rerio
ENSMUSG00000028121 Bcar3 breast cancer anti-estrogen resistance 3 protein_coding Mus_musculus

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