C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007C6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020131-ENSDARG00000016981 CGP 7955 8:15503957-15746930
GeneTranscriptPositionBiotype
ENSDARG00000016981 (bcar3)
breast cancer anti-estrogen resistance 3 		ENSDART00000110550 (bcar3-201) 15600633-15728076 protein_coding
ENSDART00000138253 (bcar3-004) 15617338-15667082 protein_coding
ENSDART00000138855 (bcar3-001) 15601337-15699183 protein_coding
ENSDART00000141763 (bcar3-003) 15678973-15746930 protein_coding
ENSDART00000142358 (bcar3-002) 15601337-15646524 protein_coding
ENSDARG00000020131 (fnbp1l)
formin binding protein 1-like 		ENSDART00000045038 (fnbp1l-001) 15503957-15595493 protein_coding
ENSDART00000137822 (fnbp1l-002) 15586651-15595250 processed_transcript
ENSDART00000141448 (fnbp1l-003) 15595071-15597524 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_0007C6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137942-ENSG00000137936 CGP 9606 1:93448131-93847150
GeneTranscriptPositionBiotype
ENSG00000137936 (BCAR3)
breast cancer anti-estrogen resistance 3 		ENST00000260502 (BCAR3-001) 93561791-93681829 protein_coding
ENST00000370243 (BCAR3-002) 93561794-93681370 protein_coding
ENST00000370244 (BCAR3-003) 93561791-93847150 protein_coding
ENST00000370247 (BCAR3-004) 93561786-93614097 protein_coding
ENST00000466632 (BCAR3-006) 93582301-93585101 processed_transcript
ENST00000469315 (BCAR3-009) 93720189-93845712 processed_transcript
ENST00000479503 (BCAR3-008) 93592306-93648822 processed_transcript
ENST00000490377 (BCAR3-007) 93589083-93590378 processed_transcript
ENST00000538653 (BCAR3-005) 93562121-93568127 retained_intron
ENST00000539242 (BCAR3-201) 93561787-93585082 protein_coding
ENSG00000137942 (FNBP1L)
formin binding protein 1-like 		ENST00000260506 (FNBP1L-201) 93448131-93554659 protein_coding
ENST00000271234 (FNBP1L-202) 93448131-93554659 protein_coding
ENST00000370253 (FNBP1L-001) 93448282-93554661 protein_coding
ENST00000424449 (FNBP1L-003) 93529710-93552579 protein_coding
ENST00000603526 (FNBP1L-004) 93543826-93549314 retained_intron
ENST00000604705 (FNBP1L-002) 93448282-93551125 protein_coding
ENSG00000230439 (RP11-488P3.1)
 ENST00000433544 (RP11-488P3.1-001) 93752924-93775444 sense_intronic

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C6_0001ENSDARG00000016981ENSDART00000110550ENSDART00000138253ENSDART00000138855ENSDART00000141763ENSDART00000142358ENSDARG00000020131ENSDART00000045038ENSDART00000137822ENSDART00000141448CIL_0007C6_0002ENSG00000137936ENST00000260502ENST00000370243ENST00000370244ENST00000370247ENST00000466632ENST00000469315ENST00000479503ENST00000490377ENST00000538653ENST00000539242ENSG00000137942ENST00000260506ENST00000271234ENST00000370253ENST00000424449ENST00000603526ENST00000604705ENSG00000230439ENST00000433544
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C6_0001ENSDARG00000016981ENSDART00000110550ENSDART00000138855ENSDART00000142358ENSDARG00000020131ENSDART00000045038ENSDART00000141448CIL_0007C6_0002ENSG00000137936ENST00000260502ENST00000370243ENST00000370244ENST00000370247ENST00000466632ENST00000538653ENST00000539242ENSG00000137942ENST00000260506ENST00000271234ENST00000370253ENST00000424449ENST00000604705ENSG00000230439ENST00000433544
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016981 ENSDART00000110550 N/A N/A N/A 0.996±0.00 N/A N/A 0.241±0.00 0.228±0.01 N/A N/A N/A N/A N/A N/A
ENSDART00000138253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138855 N/A N/A N/A 1.236±0.00 N/A N/A N/A N/A 0.118±0.00 N/A 0.338±0.00 N/A N/A N/A
ENSDART00000141763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142358 N/A N/A N/A 2.492±1.46 N/A N/A 1.492±0.00 N/A 0.182±0.00 N/A N/A N/A N/A N/A
ENSDARG00000020131 ENSDART00000045038 N/A N/A N/A 0.261±0.05 N/A N/A 3.271±0.00 19.400±0.00 0.642±0.00 N/A 3.945±0.00 N/A N/A N/A
ENSDART00000137822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141448 N/A N/A N/A 0.872±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137936 ENST00000260502 6.901±0.00 7.035±0.00 N/A 1.356±1.02 3.296±2.59 2.657±1.81 1.238±0.90 7.863±0.00 1.107±0.00 6.775±0.00 1.899±0.00 2.721±2.33 9.379±0.48 1.559±0.10
ENST00000370243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.604±0.00 0.687±0.00 N/A N/A
ENST00000370244 N/A N/A N/A 0.884±0.00 N/A N/A 0.368±0.19 N/A N/A N/A N/A 0.952±0.00 N/A 1.014±0.28
ENST00000370247 N/A N/A 0.297±0.00 N/A 1.832±0.60 N/A 0.489±0.29 1.979±0.90 1.514±0.00 N/A 9.755±0.00 N/A N/A 0.988±0.00
ENST00000466632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.710±0.00 N/A N/A N/A
ENST00000469315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538653 N/A N/A 1.165±0.00 N/A N/A 2.728±0.00 N/A N/A N/A 1.835±0.00 1.299±0.00 N/A N/A N/A
ENST00000539242 N/A 4.474±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.102±0.00 6.986±0.00 1.275±0.00
ENSG00000137942 ENST00000260506 2.380±0.00 0.659±0.00 7.942±0.00 0.898±0.57 3.871±0.65 4.152±0.00 1.362±0.33 4.541±2.18 1.862±1.45 5.303±2.03 1.479±0.78 2.758±1.52 2.743±1.24 3.809±1.19
ENST00000271234 N/A N/A N/A N/A N/A N/A 1.245±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000370253 9.596±0.00 3.302±0.00 N/A 0.970±0.24 2.511±0.84 6.385±0.00 3.545±2.08 11.015±0.00 1.305±0.09 4.194±1.49 2.791±2.20 4.410±1.32 2.927±0.32 4.795±0.99
ENST00000424449 N/A N/A N/A 1.157±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604705 N/A N/A N/A N/A N/A N/A 0.707±0.00 1.170±0.00 1.866±0.00 N/A N/A 2.174±0.00 3.388±0.00 N/A
ENSG00000230439 ENST00000433544 0.276±0.00 0.137±0.00 N/A 0.061±0.03 0.048±0.00 0.007±0.00 0.140±0.08 0.045±0.04 0.092±0.05 0.058±0.00 0.310±0.15 0.203±0.10 0.268±0.17 0.551±0.12

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