C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of G-protein signaling 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138835 RGS3 9606 + 9:113444731-113597743 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317613 RGS3-002 113463732-113542089 protein_coding
  ENST00000342620 RGS3-201 113564954-113597743 protein_coding
  ENST00000343817 RGS3-006 113501427-113597738 protein_coding
  ENST00000350696 RGS3-202 113460257-113597743 protein_coding
  ENST00000374134 RGS3-007 113580660-113597738 protein_coding
  ENST00000374136 RGS3-013 113505262-113542091 protein_coding
  ENST00000374140 RGS3-001 113444731-113597738 protein_coding
  ENST00000394646 RGS3-203 113501427-113597743 protein_coding
  ENST00000460000 RGS3-025 113517368-113536918 retained_intron
  ENST00000462143 RGS3-017 113536504-113597737 protein_coding
  ENST00000462403 RGS3-008 113593486-113597738 protein_coding
  ENST00000463806 RGS3-021 113565057-113582222 processed_transcript
  ENST00000464306 RGS3-028 113503355-113507524 processed_transcript
  ENST00000466314 RGS3-027 113501371-113507509 processed_transcript
  ENST00000466735 RGS3-029 113478871-113485691 retained_intron
  ENST00000467805 RGS3-003 113582072-113594980 protein_coding
  ENST00000470775 RGS3-023 113522256-113536918 processed_transcript
  ENST00000471324 RGS3-019 113580928-113583671 protein_coding
  ENST00000478599 RGS3-015 113463729-113597723 retained_intron
  ENST00000485822 RGS3-014 113580893-113593003 retained_intron
  ENST00000487344 RGS3-018 113581636-113597737 retained_intron
  ENST00000488259 RGS3-012 113479305-113495838 processed_transcript
  ENST00000488620 RGS3-011 113565076-113591794 retained_intron
  ENST00000489082 RGS3-020 113565057-113582242 processed_transcript
  ENST00000490241 RGS3-009 113595472-113597738 retained_intron
  ENST00000492676 RGS3-022 113536611-113541594 processed_transcript
  ENST00000496113 RGS3-026 113517270-113583690 protein_coding
  ENST00000496264 RGS3-024 113522483-113536918 processed_transcript
  ENST00000496275 RGS3-010 113565073-113595745 processed_transcript
  ENST00000497435 RGS3-004 113594144-113595094 retained_intron
  ENST00000613049 RGS3-204 113593920-113597743 protein_coding
  ENST00000620489 RGS3-030 113594129-113597729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317613ENST00000343817ENST00000374136ENST00000374140ENST00000462143ENST00000467805ENST00000478599ENST00000487344ENST00000488259ENST00000490241ENST00000620489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317613 N/A N/A 2.061±0.00 N/A 1.161±0.00 1.675±0.00 N/A N/A 1.133±0.00 N/A N/A 0.668±0.00 N/A N/A
ENST00000343817 4.776±0.00 10.969±0.00 N/A 0.402±0.00 3.709±0.00 5.013±0.00 6.280±0.00 5.053±0.00 0.718±0.00 1.174±0.00 0.687±0.04 2.660±0.74 4.758±0.08 2.198±0.00
ENST00000374136 N/A N/A N/A 0.439±0.00 N/A 1.458±0.00 N/A N/A 2.172±0.00 N/A 0.939±0.00 N/A 4.907±0.00 N/A
ENST00000374140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.619±0.00
ENST00000462143 N/A N/A N/A 5.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.209±0.00 N/A 16.459±0.00
ENST00000478599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.790±0.00 N/A N/A
ENST00000487344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.392±0.00 N/A N/A
ENST00000488259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.707±0.00 N/A N/A
ENST00000490241 N/A N/A N/A 1.419±0.00 N/A N/A N/A 4.656±0.00 N/A N/A 2.677±0.00 N/A N/A N/A
ENST00000620489 12.430±0.00 N/A 3.008±0.00 3.767±2.66 10.369±8.71 10.532±0.00 9.362±6.73 14.234±10.97 6.674±4.47 30.421±26.21 1.883±0.00 8.693±4.24 23.133±2.79 11.755±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D0 CIL_0004D0_0001 CGP 9:113410054-113597743
CIL_0002CA CIL_0002CA_0002 CGP 9:113444731-114056591

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000188 TAS inactivation of MAPK activity
GO:0005096 IBA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IBA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IBA plasma membrane
GO:0008277 TAS regulation of G-protein coupled receptor protein signaling pathway
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088605 rgs3a regulator of G-protein signaling 3a protein_coding Danio_rerio
ENSMUSG00000059810 Rgs3 regulator of G-protein signaling 3 protein_coding Mus_musculus

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