C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of G-protein signaling 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059810 Rgs3 10090 + 4:62559847-62704001 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065870 Rgs3-001 62559847-62659840 protein_coding
  ENSMUST00000084521 Rgs3-005 62619520-62703018 protein_coding
  ENSMUST00000098031 Rgs3-002 62583601-62657439 protein_coding
  ENSMUST00000107420 Rgs3-010 62674039-62703018 protein_coding
  ENSMUST00000107424 Rgs3-004 62619582-62659840 protein_coding
  ENSMUST00000124082 Rgs3-014 62668892-62690282 protein_coding
  ENSMUST00000125369 Rgs3-007 62699466-62703018 retained_intron
  ENSMUST00000126338 Rgs3-015 62663622-62689823 protein_coding
  ENSMUST00000127254 Rgs3-009 62652570-62659840 retained_intron
  ENSMUST00000138674 Rgs3-013 62674352-62690001 processed_transcript
  ENSMUST00000142565 Rgs3-011 62699680-62701153 processed_transcript
  ENSMUST00000142684 Rgs3-006 62634378-62697928 retained_intron
  ENSMUST00000143042 Rgs3-016 62623531-62631320 processed_transcript
  ENSMUST00000144489 Rgs3-008 62634378-62703018 retained_intron
  ENSMUST00000146083 Rgs3-003 62604459-62623916 processed_transcript
  ENSMUST00000153875 Rgs3-012 62700695-62704001 protein_coding
  ENSMUST00000154071 Rgs3-017 62623709-62626531 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065870ENSMUST00000084521ENSMUST00000098031ENSMUST00000107420ENSMUST00000107424ENSMUST00000125369ENSMUST00000127254ENSMUST00000138674ENSMUST00000143042ENSMUST00000144489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.463±0.00 2.500±0.67
ENSMUST00000084521 3.839±0.53 2.608±0.67 N/A 4.277±1.27 5.221±1.72 3.084±1.13 1.881±0.12 1.175±0.09 0.474±0.16 8.636±1.75 0.608±0.23 5.009±0.86 1.156±0.04 N/A
ENSMUST00000098031 N/A 2.007±0.51 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.135±1.76
ENSMUST00000107420 4.411±0.23 N/A 8.273±0.70 9.836±6.83 4.176±0.81 4.522±1.45 N/A N/A 0.501±0.06 N/A N/A 5.137±0.22 0.871±0.00 N/A
ENSMUST00000107424 5.324±1.60 0.919±0.01 2.757±0.06 1.790±0.59 3.679±0.72 2.307±0.28 4.326±0.39 2.273±0.07 0.663±0.19 9.256±1.31 1.051±0.42 5.101±1.36 1.837±1.16 N/A
ENSMUST00000125369 21.439±2.99 4.910±0.92 4.801±0.00 N/A 15.571±2.78 N/A 6.942±0.85 12.219±0.74 2.311±1.31 10.554±0.12 1.200±0.34 13.448±3.28 3.599±1.21 7.867±1.30
ENSMUST00000127254 N/A N/A N/A 1.069±0.00 3.453±0.00 N/A N/A N/A N/A N/A 0.485±0.17 6.573±0.94 1.094±0.56 N/A
ENSMUST00000138674 N/A N/A N/A 9.281±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143042 N/A 6.790±1.28 N/A N/A N/A 7.487±0.00 N/A N/A N/A 21.862±1.99 N/A 16.145±0.00 N/A N/A
ENSMUST00000144489 N/A N/A 3.245±0.00 3.380±0.00 3.056±0.00 N/A N/A N/A N/A N/A 0.531±0.22 7.841±2.26 1.720±0.00 5.246±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D0 CIL_0004D0_0002 CGP 4:62525369-62704001
CIL_0002CA CIL_0002CA_0003 CGP 4:62559847-63139708

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IBA GTPase activator activity
GO:0005634 IDA nucleus
GO:0005737 IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088605 rgs3a regulator of G-protein signaling 3a protein_coding Danio_rerio
ENSG00000138835 RGS3 regulator of G-protein signaling 3 protein_coding Homo_sapiens

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