C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: complement component 1, r subcomponent-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139178 C1RL 9606 - 12:7089587-7109273 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266542 C1RL-001 7094554-7109273 protein_coding
  ENST00000504702 C1RL-010 7094754-7097258 processed_transcript
  ENST00000534950 C1RL-008 7096770-7102085 protein_coding
  ENST00000534969 C1RL-012 7098297-7108299 nonsense_mediated_decay
  ENST00000537833 C1RL-011 7098296-7108303 nonsense_mediated_decay
  ENST00000539803 C1RL-009 7089587-7099960 nonsense_mediated_decay
  ENST00000539927 C1RL-013 7108145-7109128 retained_intron
  ENST00000543933 C1RL-005 7097154-7109197 protein_coding
  ENST00000543941 C1RL-007 7101900-7108601 retained_intron
  ENST00000544702 C1RL-003 7096391-7109238 protein_coding
  ENST00000545280 C1RL-006 7093707-7109197 protein_coding
  ENST00000545337 C1RL-002 7101605-7109210 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMusclePlacentaENST00000266542
Transcript ID Brain Kidney Muscle Placenta
ENST00000266542 1.976±0.00 17.614±0.00 3.594±0.00 4.073±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001H CIL_00001H_0001 CGP 12:6988259-7092607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005615 IDA extracellular space
GO:0006508 IEA proteolysis
GO:0006958 IEA complement activation, classical pathway
GO:0045087 IEA innate immune response
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000038527 C1rl complement component 1, r subcomponent-like protein_coding Mus_musculus

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