C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182326-ENSG00000159403 CGP 9606 12:6988259-7092607
GeneTranscriptPositionBiotype
ENSG00000111684 (LPCAT3)
lysophosphatidylcholine acyltransferase 3 		ENST00000261407 (LPCAT3-001) 6976186-7018510 protein_coding
ENST00000535021 (LPCAT3-011) 6976806-6981148 processed_transcript
ENST00000535479 (LPCAT3-003) 6976186-7018477 nonsense_mediated_decay
ENST00000536797 (LPCAT3-004) 6977840-7018474 nonsense_mediated_decay
ENST00000536971 (LPCAT3-009) 6981542-7018474 processed_transcript
ENST00000537179 (LPCAT3-007) 6978041-6979270 retained_intron
ENST00000538910 (LPCAT3-008) 6981809-7018474 nonsense_mediated_decay
ENST00000538987 (LPCAT3-012) 6979595-6981157 retained_intron
ENST00000540060 (LPCAT3-010) 6980707-6981858 processed_transcript
ENST00000540090 (LPCAT3-006) 6977647-7018474 nonsense_mediated_decay
ENST00000543794 (LPCAT3-005) 6977699-7018474 nonsense_mediated_decay
ENST00000545459 (LPCAT3-013) 6981560-6983465 processed_transcript
ENST00000620843 (LPCAT3-014) 6981294-6982783 processed_transcript
ENSG00000139178 (C1RL)
complement component 1, r subcomponent-like 		ENST00000266542 (C1RL-001) 7094554-7109273 protein_coding
ENST00000504702 (C1RL-010) 7094754-7097258 processed_transcript
ENST00000534950 (C1RL-008) 7096770-7102085 protein_coding
ENST00000534969 (C1RL-012) 7098297-7108299 nonsense_mediated_decay
ENST00000537833 (C1RL-011) 7098296-7108303 nonsense_mediated_decay
ENST00000539803 (C1RL-009) 7089587-7099960 nonsense_mediated_decay
ENST00000539927 (C1RL-013) 7108145-7109128 retained_intron
ENST00000543933 (C1RL-005) 7097154-7109197 protein_coding
ENST00000543941 (C1RL-007) 7101900-7108601 retained_intron
ENST00000544702 (C1RL-003) 7096391-7109238 protein_coding
ENST00000545280 (C1RL-006) 7093707-7109197 protein_coding
ENST00000545337 (C1RL-002) 7101605-7109210 protein_coding
ENSG00000159403 (C1R)
complement component 1, r subcomponent 		ENST00000535233 (C1R-003) 7080421-7092472 protein_coding
ENST00000536053 (C1R-004) 7080421-7091892 protein_coding
ENST00000536092 (C1R-008) 7091156-7092493 retained_intron
ENST00000538050 (C1R-013) 7089696-7091891 protein_coding
ENST00000540242 (C1R-009) 7089655-7092493 protein_coding
ENST00000540394 (C1R-002) 7080214-7092441 retained_intron
ENST00000540610 (C1R-006) 7089465-7092540 protein_coding
ENST00000541042 (C1R-007) 7089628-7092493 protein_coding
ENST00000542285 (C1R-001) 7080209-7092607 protein_coding
ENST00000543362 (C1R-012) 7089358-7092430 nonsense_mediated_decay
ENST00000543835 (C1R-011) 7089615-7092441 protein_coding
ENST00000543851 (C1R-014) 7089648-7090358 retained_intron
ENST00000545466 (C1R-010) 7089936-7092441 retained_intron
ENST00000602298 (C1R-015) 7080419-7087844 retained_intron
ENSG00000182326 (C1S)
complement component 1, s subcomponent 		ENST00000328916 (C1S-003) 7060515-7071032 protein_coding
ENST00000360817 (C1S-004) 7060676-7070943 protein_coding
ENST00000402681 (C1S-017) 7060685-7070960 protein_coding
ENST00000403949 (C1S-007) 7061384-7064380 protein_coding
ENST00000406697 (C1S-001) 6988259-7071032 protein_coding
ENST00000413211 (C1S-006) 7061212-7062985 protein_coding
ENST00000423384 (C1S-005) 7061212-7062978 protein_coding
ENST00000443875 (C1S-002) 7061839-7071030 nonsense_mediated_decay
ENST00000461983 (C1S-014) 7066631-7070113 retained_intron
ENST00000463798 (C1S-011) 7064178-7065412 retained_intron
ENST00000470326 (C1S-013) 7066192-7067662 retained_intron
ENST00000473545 (C1S-012) 7065240-7066313 retained_intron
ENST00000488701 (C1S-009) 7060744-7062808 retained_intron
ENST00000489541 (C1S-008) 7060717-7062228 retained_intron
ENST00000495053 (C1S-010) 7063909-7065898 retained_intron
ENST00000495061 (C1S-016) 7067091-7070240 processed_transcript
ENST00000497061 (C1S-015) 7067395-7068530 retained_intron
ENST00000541647 (C1S-018) 7060723-7065178 processed_transcript
ENST00000542978 (C1S-019) 7062583-7066618 protein_coding
ENST00000543187 (C1S-020) 7060725-7062808 processed_transcript
ENST00000617865 (C1S-201) 7060676-7071029 protein_coding
ENSG00000239701 (RP3-461F17.1)
 ENST00000468816 (RP3-461F17.1-001) 7032108-7032398 processed_pseudogene
ENSG00000257078 (RP3-461F17.2)
 ENST00000543250 (RP3-461F17.2-001) 7041156-7041641 processed_pseudogene
CIL_00001H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038521-ENSMUSG00000098470 CGP 10090 6:124530345-124581171
GeneTranscriptPositionBiotype
ENSMUSG00000038521 (C1s1)
complement component 1, s subcomponent 1 		ENSMUST00000159143 (C1s1-005) 124536192-124540377 retained_intron
ENSMUST00000159463 (C1s1-004) 124540321-124542303 protein_coding
ENSMUST00000160505 (C1s1-001) 124530345-124542321 protein_coding
ENSMUST00000162443 (C1s1-002) 124530348-124542359 protein_coding
ENSMUST00000162844 (C1s1-003) 124540939-124542309 protein_coding
ENSMUSG00000089961 (Gm16567)
predicted gene 16567 		ENSMUST00000160967 (Gm16567-001) 124530911-124542310 antisense
ENSMUSG00000098470 (C1rb)
complement component 1, r subcomponent B 		ENSMUST00000184647 (C1rb-001) 124570294-124581171 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001H_0001ENSG00000111684ENST00000261407ENST00000535021ENST00000535479ENST00000536797ENST00000536971ENST00000537179ENST00000538910ENST00000538987ENST00000540060ENST00000540090ENST00000543794ENST00000545459ENST00000620843ENSG00000139178ENST00000266542ENST00000504702ENST00000534950ENST00000534969ENST00000537833ENST00000539803ENST00000539927ENST00000543933ENST00000543941ENST00000544702ENST00000545280ENST00000545337ENSG00000159403ENST00000535233ENST00000536053ENST00000536092ENST00000538050ENST00000540242ENST00000540394ENST00000540610ENST00000541042ENST00000542285ENST00000543362ENST00000543835ENST00000543851ENST00000545466ENST00000602298ENSG00000182326ENST00000328916ENST00000360817ENST00000402681ENST00000403949ENST00000406697ENST00000413211ENST00000423384ENST00000443875ENST00000461983ENST00000463798ENST00000470326ENST00000473545ENST00000488701ENST00000489541ENST00000495053ENST00000495061ENST00000497061ENST00000541647ENST00000542978ENST00000543187ENST00000617865ENSG00000239701ENST00000468816ENSG00000257078ENST00000543250CIL_00001H_0002ENSMUSG00000038521ENSMUST00000159143ENSMUST00000159463ENSMUST00000160505ENSMUST00000162443ENSMUST00000162844ENSMUSG00000089961ENSMUST00000160967ENSMUSG00000098470ENSMUST00000184647
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001H_0001ENSG00000111684ENST00000261407ENST00000535479ENSG00000139178ENST00000266542ENSG00000159403ENST00000535233ENST00000536053ENST00000542285ENSG00000182326ENST00000328916ENST00000360817ENST00000402681ENST00000443875ENSG00000239701ENST00000468816ENSG00000257078ENST00000543250CIL_00001H_0002ENSMUSG00000038521ENSMUST00000159143ENSMUST00000159463ENSMUST00000160505ENSMUST00000162443ENSMUST00000162844ENSMUSG00000089961ENSMUST00000160967ENSMUSG00000098470ENSMUST00000184647
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111684 ENST00000261407 N/A N/A 3.774±0.00 8.082±0.00 N/A N/A N/A 33.812±0.00 N/A N/A 11.222±5.11 N/A 54.174±26.72 N/A
ENST00000535021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535479 N/A N/A 2.592±0.00 1.610±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139178 ENST00000266542 N/A N/A N/A 1.976±0.00 N/A N/A N/A 17.614±0.00 N/A N/A 3.594±0.00 N/A 4.073±0.00 N/A
ENST00000504702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000159403 ENST00000535233 121.580±0.00 181.820±0.00 N/A 5.422±0.00 43.121±12.90 70.449±61.18 32.735±29.33 99.835±26.50 264.952±228.57 71.879±52.51 11.911±6.99 46.701±31.91 23.919±0.00 79.440±52.25
ENST00000536053 219.436±0.00 176.893±0.00 10.694±0.00 4.560±2.83 37.739±23.49 76.931±68.41 13.888±10.74 76.089±29.54 120.471±106.68 33.138±20.03 8.650±5.89 152.665±129.76 44.711±8.95 84.192±61.86
ENST00000536092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542285 98.812±0.00 N/A N/A 2.871±2.22 17.149±0.00 49.690±41.98 17.562±15.78 72.752±25.24 10.603±0.00 41.346±0.00 6.587±0.00 266.969±269.84 15.635±5.60 N/A
ENST00000543362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182326 ENST00000328916 38.173±0.00 N/A N/A 3.097±2.18 26.364±11.08 39.376±29.46 2.302±0.00 117.400±0.00 17.898±0.00 8.690±0.00 N/A 243.496±220.88 N/A 65.002±0.00
ENST00000360817 70.895±0.00 N/A 3.452±0.00 1.572±0.00 43.012±0.00 31.325±15.13 18.987±14.43 145.094±125.47 101.086±71.53 36.490±21.17 8.668±2.74 43.953±28.03 24.367±0.00 20.230±0.00
ENST00000402681 66.531±0.00 118.970±0.00 4.523±0.00 6.878±0.00 33.685±11.63 64.223±56.50 12.852±10.34 42.214±24.49 159.509±0.00 45.140±35.99 11.107±0.00 168.907±0.00 19.838±5.03 64.627±32.01
ENST00000403949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443875 48.694±0.00 120.917±0.00 N/A 5.629±0.00 45.556±0.00 118.714±0.00 24.021±0.00 22.719±0.00 197.142±0.00 70.349±0.00 10.554±0.00 200.230±0.00 14.974±2.64 125.127±0.00
ENST00000461983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239701 ENST00000468816 N/A 0.096±0.00 N/A N/A 0.237±0.00 N/A N/A N/A 1.060±0.00 N/A N/A 0.185±0.09 0.175±0.00 0.141±0.06
ENSG00000257078 ENST00000543250 N/A 0.179±0.00 N/A N/A 0.189±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038521 ENSMUST00000159143 N/A N/A N/A 0.565±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.870±0.00 N/A
ENSMUST00000159463 N/A 7.829±1.42 N/A N/A 38.420±0.00 10.448±0.58 N/A N/A 50.210±0.00 N/A N/A N/A N/A N/A
ENSMUST00000160505 N/A N/A 31.314±4.55 N/A N/A N/A 1.323±0.00 N/A 8.080±3.34 N/A 1.581±0.53 N/A 2.062±2.05 0.319±0.23
ENSMUST00000162443 51.675±6.23 2.096±0.26 75.341±15.88 0.088±0.05 37.390±9.33 10.928±1.98 5.319±0.44 8.502±1.29 38.678±17.18 22.607±0.42 4.409±0.85 21.698±15.46 3.977±4.74 1.677±0.83
ENSMUST00000162844 N/A 13.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000089961 ENSMUST00000160967 N/A N/A N/A 0.482±0.00 N/A N/A N/A N/A N/A N/A 10.903±1.80 111.021±22.02 3.036±1.14 1.620±0.00
ENSMUSG00000098470 ENSMUST00000184647 0.028±0.00 0.169±0.05 0.036±0.00 0.020±0.00 0.057±0.03 N/A 0.010±0.00 N/A 0.210±0.49 N/A 0.072±0.00 0.136±0.08 0.027±0.03 0.045±0.04

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