C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF-hand calcium binding domain 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140025 EFCAB11 9606 - 14:89794669-89954777 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316738 EFCAB11-001 89794669-89954689 protein_coding
  ENST00000538485 EFCAB11-002 89923308-89954750 protein_coding
  ENST00000550103 EFCAB11-012 89848433-89932594 processed_transcript
  ENST00000553871 EFCAB11-008 89797157-89952605 processed_transcript
  ENST00000554761 EFCAB11-006 89931044-89952588 retained_intron
  ENST00000555430 EFCAB11-009 89938007-89952540 processed_transcript
  ENST00000555608 EFCAB11-013 89831064-89954741 processed_transcript
  ENST00000555872 EFCAB11-005 89795147-89954557 protein_coding
  ENST00000556005 EFCAB11-004 89923326-89954523 protein_coding
  ENST00000556078 EFCAB11-011 89799173-89924627 processed_transcript
  ENST00000556609 EFCAB11-007 89797137-89954777 protein_coding
  ENST00000556639 EFCAB11-003 89829831-89954730 nonsense_mediated_decay
  ENST00000557685 EFCAB11-010 89797127-89954001 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000555608ENST00000556609
Transcript ID Ovary Testis
ENST00000555608 11.397±0.00 38.149±0.00
ENST00000556609 N/A 38.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C7 CIL_0005C7_0001 CGP 14:89124871-89954777
CIL_0005C6 CIL_0005C6_0001 CGP 14:89794669-90044768

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043740 efcab11 EF-hand calcium binding domain 11 protein_coding Danio_rerio
ENSMUSG00000021176 Efcab11 EF-hand calcium binding domain 11 protein_coding Mus_musculus

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