C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | nei endonuclease VIII-like 1 (E. coli) | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000140398  |
NEIL1 | 9606 | + |
15:75346955-75357114  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000355059 |
NEIL1-001 | 75346990-75357114 | protein_coding | ||
| ENST00000561643 |
NEIL1-002 | 75347090-75355245 | retained_intron | ||
| ENST00000564257 |
NEIL1-017 | 75347860-75349301 | protein_coding | ||
| ENST00000564500 |
NEIL1-006 | 75346955-75348971 | protein_coding | ||
| ENST00000564738 |
NEIL1-020 | 75348935-75354292 | retained_intron | ||
| ENST00000564784 |
NEIL1-003 | 75347619-75355251 | protein_coding | ||
| ENST00000564951 |
NEIL1-012 | 75347342-75349690 | retained_intron | ||
| ENST00000565051 |
NEIL1-016 | 75347727-75352701 | protein_coding | ||
| ENST00000565121 |
NEIL1-005 | 75353391-75355247 | retained_intron | ||
| ENST00000566313 |
NEIL1-008 | 75347038-75349057 | protein_coding | ||
| ENST00000566752 |
NEIL1-007 | 75347013-75349098 | protein_coding | ||
| ENST00000567005 |
NEIL1-018 | 75347981-75352061 | protein_coding | ||
| ENST00000567393 |
NEIL1-023 | 75353154-75355215 | retained_intron | ||
| ENST00000567547 |
NEIL1-021 | 75351946-75352977 | retained_intron | ||
| ENST00000567657 |
NEIL1-014 | 75347435-75352230 | protein_coding | ||
| ENST00000567681 |
NEIL1-015 | 75347653-75348651 | processed_transcript | ||
| ENST00000567959 |
NEIL1-011 | 75347099-75352963 | processed_transcript | ||
| ENST00000568059 |
NEIL1-009 | 75347053-75349170 | protein_coding | ||
| ENST00000568519 |
NEIL1-013 | 75347383-75352179 | nonsense_mediated_decay | ||
| ENST00000568881 |
NEIL1-010 | 75347069-75349024 | protein_coding | ||
| ENST00000569035 |
NEIL1-004 | 75347638-75355247 | protein_coding | ||
| ENST00000569390 |
NEIL1-022 | 75347392-75348222 | processed_transcript | ||
| ENST00000569506 |
NEIL1-019 | 75348399-75349151 | protein_coding | ||
| ENST00000569758 |
NEIL1-024 | 75354603-75355245 | retained_intron | ||
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000737 | IEA | DNA catabolic process, endonucleolytic |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003684 | IEA | damaged DNA binding |
| GO:0003906 | IEA | DNA-(apurinic or apyrimidinic site) lyase activity |
| GO:0005634 | IDA | nucleus |
| GO:0005694 | IEA | chromosome |
| GO:0005737 | IDA | cytoplasm |
| GO:0005856 | IEA | cytoskeleton |
| GO:0006281 | IEA | DNA repair |
| GO:0006284 | IEA:IDA | base-excision repair |
| GO:0006289 | IEA | nucleotide-excision repair |
| GO:0006979 | IDA | response to oxidative stress |
| GO:0008022 | IPI | protein C-terminus binding |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016798 | IDA | hydrolase activity, acting on glycosyl bonds |
| GO:0016799 | IEA | hydrolase activity, hydrolyzing N-glycosyl compounds |
| GO:0016829 | IEA | lyase activity |
| GO:0019104 | IEA | DNA N-glycosylase activity |
| GO:0032074 | IDA | negative regulation of nuclease activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000018061
|
neil1 | nei endonuclease VIII-like 1 (E. coli) | protein_coding | Danio_rerio | |
|
ENSMUSG00000032298
|
Neil1 | nei endonuclease VIII-like 1 (E. coli) | protein_coding | Mus_musculus | |
