C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mannosidase, alpha, class 2C, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140400 MAN2C1 9606 - 15:75355207-75368630 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267978 MAN2C1-001 75355207-75368630 protein_coding
  ENST00000421803 MAN2C1-005 75361321-75368605 nonsense_mediated_decay
  ENST00000561615 MAN2C1-020 75364588-75368603 protein_coding
  ENST00000561693 MAN2C1-041 75355794-75357367 retained_intron
  ENST00000562067 MAN2C1-045 75355792-75356885 retained_intron
  ENST00000562071 MAN2C1-016 75364526-75368612 nonsense_mediated_decay
  ENST00000562228 MAN2C1-030 75360632-75362172 retained_intron
  ENST00000562461 MAN2C1-031 75360119-75361062 retained_intron
  ENST00000563013 MAN2C1-029 75361098-75362174 retained_intron
  ENST00000563058 MAN2C1-027 75360955-75362391 retained_intron
  ENST00000563368 MAN2C1-037 75358460-75359959 retained_intron
  ENST00000563441 MAN2C1-002 75358315-75368605 retained_intron
  ENST00000563528 MAN2C1-043 75356190-75356819 retained_intron
  ENST00000563539 MAN2C1-018 75362712-75368605 processed_transcript
  ENST00000563596 MAN2C1-032 75359621-75360523 retained_intron
  ENST00000563622 MAN2C1-006 75355792-75368604 protein_coding
  ENST00000563660 MAN2C1-046 75355210-75355746 processed_transcript
  ENST00000563794 MAN2C1-034 75359117-75360061 retained_intron
  ENST00000564570 MAN2C1-039 75356606-75359180 retained_intron
  ENST00000564785 MAN2C1-011 75357735-75363177 retained_intron
  ENST00000564929 MAN2C1-013 75355792-75356957 retained_intron
  ENST00000565534 MAN2C1-008 75364140-75368593 retained_intron
  ENST00000565652 MAN2C1-021 75366542-75368588 retained_intron
  ENST00000565683 MAN2C1-007 75355792-75368595 protein_coding
  ENST00000565699 MAN2C1-024 75363754-75364608 retained_intron
  ENST00000565784 MAN2C1-019 75362375-75368605 nonsense_mediated_decay
  ENST00000565801 MAN2C1-025 75361885-75363179 retained_intron
  ENST00000565953 MAN2C1-033 75359342-75360126 retained_intron
  ENST00000566013 MAN2C1-036 75358643-75359988 retained_intron
  ENST00000566099 MAN2C1-040 75355805-75359100 retained_intron
  ENST00000566253 MAN2C1-028 75361097-75362212 processed_transcript
  ENST00000566256 MAN2C1-014 75364498-75368612 protein_coding
  ENST00000566569 MAN2C1-042 75356120-75357048 retained_intron
  ENST00000566634 MAN2C1-004 75359623-75368605 nonsense_mediated_decay
  ENST00000567163 MAN2C1-035 75356299-75359988 retained_intron
  ENST00000567360 MAN2C1-044 75358046-75358619 retained_intron
  ENST00000568374 MAN2C1-017 75364116-75368605 protein_coding
  ENST00000568944 MAN2C1-026 75361296-75362637 retained_intron
  ENST00000569069 MAN2C1-022 75366516-75368006 retained_intron
  ENST00000569176 MAN2C1-038 75358462-75359762 retained_intron
  ENST00000569355 MAN2C1-015 75364046-75368609 nonsense_mediated_decay
  ENST00000569482 MAN2C1-009 75355792-75368592 protein_coding
  ENST00000570257 MAN2C1-023 75361638-75366592 nonsense_mediated_decay
  ENST00000618257 MAN2C1-201 75355794-75359680 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungMuscleOvaryPlacentaENST00000563539ENST00000569482ENST00000618257
Transcript ID Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000563539 N/A N/A N/A N/A N/A 11.548±0.00 N/A N/A
ENST00000569482 18.119±0.00 9.806±0.00 9.242±5.52 7.450±0.00 22.372±0.00 10.749±7.29 23.377±0.00 17.882±5.43
ENST00000618257 N/A N/A N/A 15.460±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559 IEA alpha-mannosidase activity
GO:0005975 IEA carbohydrate metabolic process
GO:0006013 IEA mannose metabolic process
GO:0008270 IEA zinc ion binding
GO:0015923 IEA mannosidase activity
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079835 man2c1 mannosidase, alpha, class 2C, member 1 protein_coding Danio_rerio
ENSMUSG00000032295 Man2c1 mannosidase, alpha, class 2C, member 1 protein_coding Mus_musculus

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