C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: septin 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140623 SEPT12 9606 - 16:4777669-4788521 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000268231 SEPT12-001 4777669-4788521 protein_coding
  ENST00000396693 SEPT12-003 4777669-4788346 protein_coding
  ENST00000587603 SEPT12-002 4777673-4788347 nonsense_mediated_decay
  ENST00000588241 SEPT12-008 4777669-4785836 nonsense_mediated_decay
  ENST00000590303 SEPT12-006 4785709-4788348 retained_intron
  ENST00000590741 SEPT12-005 4783931-4788352 nonsense_mediated_decay
  ENST00000591624 SEPT12-007 4786078-4788254 protein_coding
  ENST00000591861 SEPT12-004 4784239-4788398 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainLiverMuscleTestisENST00000268231ENST00000396693ENST00000587603ENST00000590303ENST00000590741
Transcript ID Adipose Adrenal Brain Liver Muscle Testis
ENST00000268231 N/A N/A 0.216±0.00 N/A N/A 20.758±0.00
ENST00000396693 N/A N/A N/A N/A 0.037±0.00 46.267±18.26
ENST00000587603 0.025±0.00 N/A N/A N/A N/A 45.535±0.00
ENST00000590303 0.114±0.00 0.633±0.00 0.489±0.00 0.144±0.00 N/A N/A
ENST00000590741 0.088±0.00 N/A N/A N/A N/A 34.849±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004Y CIL_00004Y_0001 CGP 16:4777669-4796491

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001725 ISS stress fiber
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005525 IEA:ISS GTP binding
GO:0005819 IDA spindle
GO:0007049 IEA cell cycle
GO:0007059 IEA chromosome segregation
GO:0015630 IDA microtubule cytoskeleton
GO:0016021 IEA integral component of membrane
GO:0019003 ISS GDP binding
GO:0030496 IDA midbody
GO:0031105 ISS septin complex
GO:0032154 ISS cleavage furrow
GO:0035091 ISS phosphatidylinositol binding
GO:0042803 ISS protein homodimerization activity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051301 IEA cell division
GO:0097227 IDA sperm annulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019191 sept12 septin 12 protein_coding Danio_rerio
ENSMUSG00000022542 Sept12 septin 12 protein_coding Mus_musculus

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