C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00004Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140623-ENSG00000267795 CGP 9606 16:4777669-4796491
GeneTranscriptPositionBiotype
ENSG00000140623 (SEPT12)
septin 12 		ENST00000268231 (SEPT12-001) 4777669-4788521 protein_coding
ENST00000396693 (SEPT12-003) 4777669-4788346 protein_coding
ENST00000587603 (SEPT12-002) 4777673-4788347 nonsense_mediated_decay
ENST00000588241 (SEPT12-008) 4777669-4785836 nonsense_mediated_decay
ENST00000590303 (SEPT12-006) 4785709-4788348 retained_intron
ENST00000590741 (SEPT12-005) 4783931-4788352 nonsense_mediated_decay
ENST00000591624 (SEPT12-007) 4786078-4788254 protein_coding
ENST00000591861 (SEPT12-004) 4784239-4788398 processed_transcript
ENSG00000267077 (RP11-127I20.5)
 ENST00000592465 (RP11-127I20.5-001) 4795265-4796532 antisense
ENSG00000267795 (SMIM22)
small integral membrane protein 22 		ENST00000586005 (SMIM22-008) 4795421-4796281 protein_coding
ENST00000586440 (SMIM22-011) 4795713-4796491 protein_coding
ENST00000588500 (SMIM22-005) 4795703-4796316 protein_coding
ENST00000588606 (SMIM22-007) 4795378-4796281 protein_coding
ENST00000588894 (SMIM22-004) 4795703-4796311 retained_intron
ENST00000589327 (SMIM22-002) 4788456-4796281 protein_coding
ENST00000589721 (SMIM22-001) 4788397-4796281 protein_coding
ENST00000591004 (SMIM22-006) 4788413-4795336 retained_intron
ENST00000591870 (SMIM22-010) 4795680-4796279 protein_coding
ENST00000615471 (SMIM22-201) 4788397-4796231 protein_coding
ENST00000615889 (SMIM22-202) 4788397-4796491 protein_coding
CIL_00004Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022542-ENSMUSG00000096215 CGP 10090 16:4986858-5008309
GeneTranscriptPositionBiotype
ENSMUSG00000022542 (Sept12)
septin 12 		ENSMUST00000170323 (Sept12-201) 4986858-4997852 protein_coding
ENSMUSG00000096215 (Smim22)
small integral membrane protein 22 		ENSMUST00000178155 (Smim22-001) 5007337-5008309 protein_coding
ENSMUST00000183381 (Smim22-006) 5007352-5008309 processed_transcript
ENSMUST00000183477 (Smim22-007) 5007359-5008309 processed_transcript
ENSMUST00000183631 (Smim22-008) 5007768-5008309 retained_intron
ENSMUST00000183821 (Smim22-003) 5007316-5008042 retained_intron
ENSMUST00000184256 (Smim22-009) 5007352-5008306 protein_coding
ENSMUST00000184439 (Smim22-002) 5007288-5008306 protein_coding
ENSMUST00000185147 (Smim22-004) 5007352-5008309 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004Y_0001ENSG00000140623ENST00000268231ENST00000396693ENST00000587603ENST00000588241ENST00000590303ENST00000590741ENST00000591624ENST00000591861ENSG00000267077ENST00000592465ENSG00000267795ENST00000586005ENST00000586440ENST00000588500ENST00000588606ENST00000588894ENST00000589327ENST00000589721ENST00000591004ENST00000591870ENST00000615471ENST00000615889CIL_00004Y_0002ENSMUSG00000022542ENSMUST00000170323ENSMUSG00000096215ENSMUST00000178155ENSMUST00000183381ENSMUST00000183477ENSMUST00000183631ENSMUST00000183821ENSMUST00000184256ENSMUST00000184439ENSMUST00000185147
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004Y_0001ENSG00000140623ENST00000268231ENST00000396693ENST00000587603ENST00000590303ENST00000590741ENSG00000267077ENST00000592465ENSG00000267795ENST00000586005ENST00000586440ENST00000588606ENST00000588894ENST00000591004ENST00000591870CIL_00004Y_0002ENSMUSG00000022542ENSMUST00000170323ENSMUSG00000096215ENSMUST00000178155ENSMUST00000183381ENSMUST00000183477ENSMUST00000183821ENSMUST00000184256ENSMUST00000184439ENSMUST00000185147
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140623 ENST00000268231 N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.758±0.00
ENST00000396693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A 46.267±18.26
ENST00000587603 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.535±0.00
ENST00000588241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590303 0.114±0.00 0.633±0.00 N/A 0.489±0.00 N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A
ENST00000590741 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.849±0.00
ENST00000591624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267077 ENST00000592465 N/A N/A N/A 0.829±0.00 1.883±0.00 4.764±0.00 0.173±0.00 1.802±0.00 0.087±0.00 N/A N/A 0.877±0.00 0.356±0.00 N/A
ENSG00000267795 ENST00000586005 N/A N/A N/A N/A 3.410±0.00 15.005±0.00 N/A 3.834±0.00 N/A 7.972±0.00 N/A 9.082±4.38 3.492±2.02 N/A
ENST00000586440 N/A N/A N/A 0.329±0.00 N/A N/A 0.223±0.14 N/A N/A N/A N/A N/A 0.429±0.00 N/A
ENST00000588500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588606 N/A N/A N/A N/A 8.611±4.21 25.999±0.00 N/A 6.930±0.00 3.889±0.00 8.772±6.18 N/A 8.854±3.20 8.001±0.00 N/A
ENST00000588894 N/A N/A N/A 1.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591004 N/A N/A N/A 0.326±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591870 0.215±0.00 N/A N/A N/A 1.717±0.00 15.447±0.00 0.161±0.00 N/A 0.072±0.00 N/A N/A N/A 2.315±0.00 N/A
ENST00000615471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022542 ENSMUST00000170323 0.021±0.01 N/A 0.055±0.01 0.004±0.00 0.023±0.01 N/A 0.051±0.02 0.061±0.03 0.007±0.01 0.026±0.01 N/A 0.154±0.09 0.039±0.04 29.173±9.53
ENSMUSG00000096215 ENSMUST00000178155 0.903±0.26 N/A 8.033±1.06 0.228±0.07 4.473±0.00 17.616±3.73 N/A N/A 2.118±0.77 7.492±0.00 N/A 5.245±3.04 6.020±0.57 0.607±0.00
ENSMUST00000183381 0.277±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183477 N/A N/A N/A N/A 5.427±0.29 N/A N/A N/A 2.385±0.09 N/A N/A 9.566±3.67 1.076±0.00 N/A
ENSMUST00000183631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.214±0.05
ENSMUST00000184256 N/A N/A N/A 0.308±0.00 1.821±0.30 18.421±4.78 0.348±0.00 N/A 1.452±0.00 6.102±0.84 N/A 3.395±0.96 N/A 0.227±0.00
ENSMUST00000184439 0.206±0.00 0.244±0.00 N/A 0.129±0.00 3.151±0.79 22.870±2.54 N/A 25.722±3.40 2.851±0.95 9.850±1.60 N/A 6.281±3.81 0.713±0.13 N/A
ENSMUST00000185147 6.161±0.08 0.310±0.07 25.874±4.18 0.276±0.16 3.892±1.77 57.533±9.72 0.619±0.37 50.866±13.32 7.399±3.59 21.071±2.47 N/A 10.539±3.99 13.761±9.25 0.926±0.64

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