C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mediator complex subunit 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141026 MED9 9606 + 17:17476986-17493226 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000268711 MED9-001 17476986-17493226 protein_coding
  ENST00000580462 MED9-002 17476994-17485592 protein_coding
  ENST00000581315 MED9-003 17477025-17491471 nonsense_mediated_decay
  ENST00000585041 MED9-005 17477006-17477684 processed_transcript
  ENST00000624097 MED9-004 17485022-17488372 TEC

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000268711ENST00000585041ENST00000624097
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000268711 6.741±0.00 7.191±0.00 1.078±0.00 9.415±3.27 6.911±0.00 3.083±2.33 6.638±3.94 7.510±5.89 2.895±1.17 2.742±1.43 5.126±1.25 5.628±2.84 7.151±1.64 10.484±0.97
ENST00000585041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.377±0.00 N/A N/A N/A
ENST00000624097 N/A 0.472±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.986±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0001 VISTA 17:17235872-17840873
CIL_0000NW CIL_0000NW_0001 CGP 17:17303335-17493226
CIL_0000NV CIL_0000NV_0001 CGP 17:17476986-17496395

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IPI protein binding
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 IEA mediator complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096631 MED9 mediator complex subunit 9 protein_coding Danio_rerio
ENSMUSG00000061650 Med9 mediator complex subunit 9 protein_coding Mus_musculus

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