C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000NW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205309-ENSG00000141026 CGP 9606 17:17303335-17493226
GeneTranscriptPositionBiotype
ENSG00000141026 (MED9)
mediator complex subunit 9 		ENST00000268711 (MED9-001) 17476986-17493226 protein_coding
ENST00000580462 (MED9-002) 17476994-17485592 protein_coding
ENST00000581315 (MED9-003) 17477025-17491471 nonsense_mediated_decay
ENST00000585041 (MED9-005) 17477006-17477684 processed_transcript
ENST00000624097 (MED9-004) 17485022-17488372 TEC
ENSG00000205309 (NT5M)
5',3'-nucleotidase, mitochondrial 		ENST00000389022 (NT5M-007) 17303335-17347661 protein_coding
ENST00000470418 (NT5M-004) 17303390-17346858 nonsense_mediated_decay
ENST00000478373 (NT5M-002) 17303366-17344866 nonsense_mediated_decay
ENST00000480529 (NT5M-005) 17345269-17347152 processed_transcript
ENST00000483704 (NT5M-003) 17303678-17347663 nonsense_mediated_decay
ENST00000582909 (NT5M-006) 17333511-17347208 processed_transcript
ENST00000616989 (NT5M-201) 17303335-17347661 protein_coding
ENSG00000215030 (RPL13P12)
ribosomal protein L13 pseudogene 12 		ENST00000392730 (RPL13P12-001) 17383377-17384012 processed_pseudogene
ENSG00000227158 (AC073621.2)
 ENST00000381380 (AC073621.2-001) 17422681-17423704 processed_pseudogene
CIL_0000NW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032615-ENSMUSG00000061650 CGP 10090 11:59839447-59962205
GeneTranscriptPositionBiotype
ENSMUSG00000019373 (Cops3)
COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana) 		ENSMUST00000019517 (Cops3-001) 59817795-59839838 protein_coding
ENSMUST00000124101 (Cops3-002) 59823286-59839838 processed_transcript
ENSMUST00000126489 (Cops3-007) 59817795-59818687 processed_transcript
ENSMUST00000130027 (Cops3-005) 59826210-59839838 processed_transcript
ENSMUST00000133652 (Cops3-006) 59836638-59839812 processed_transcript
ENSMUST00000136901 (Cops3-008) 59824314-59833293 processed_transcript
ENSMUST00000141415 (Cops3-003) 59833091-59839752 protein_coding
ENSMUST00000156837 (Cops3-004) 59821360-59836935 protein_coding
ENSMUSG00000032615 (Nt5m)
5',3'-nucleotidase, mitochondrial 		ENSMUST00000102695 (Nt5m-001) 59848073-59876533 protein_coding
ENSMUST00000137695 (Nt5m-004) 59848104-59876533 processed_transcript
ENSMUST00000149076 (Nt5m-002) 59839447-59876533 processed_transcript
ENSMUST00000154699 (Nt5m-003) 59839447-59880968 processed_transcript
ENSMUSG00000061650 (Med9)
mediator complex subunit 9 		ENSMUST00000081980 (Med9-001) 59948206-59962205 protein_coding
ENSMUSG00000084766 (Gm12714)
predicted gene 12714 		ENSMUST00000143391 (Gm12714-001) 59898374-59907319 lincRNA
ENSMUSG00000085260 (Med9os)
mediator complex subunit 9, opposite strand 		ENSMUST00000129175 (Med9os-001) 59946889-59948091 antisense
ENSMUST00000139794 (Med9os-002) 59946889-59948141 antisense
ENSMUST00000146334 (Med9os-003) 59946889-59948142 antisense
ENSMUSG00000085551 (1810063I02Rik)
RIKEN cDNA 1810063I02 gene 		ENSMUST00000130205 (1810063I02Rik-001) 59921499-59921889 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NW_0001ENSG00000141026ENST00000268711ENST00000580462ENST00000581315ENST00000585041ENST00000624097ENSG00000205309ENST00000389022ENST00000470418ENST00000478373ENST00000480529ENST00000483704ENST00000582909ENST00000616989ENSG00000215030ENST00000392730ENSG00000227158ENST00000381380CIL_0000NW_0002ENSMUSG00000019373ENSMUST00000019517ENSMUST00000124101ENSMUST00000126489ENSMUST00000130027ENSMUST00000133652ENSMUST00000136901ENSMUST00000141415ENSMUST00000156837ENSMUSG00000032615ENSMUST00000102695ENSMUST00000137695ENSMUST00000149076ENSMUST00000154699ENSMUSG00000061650ENSMUST00000081980ENSMUSG00000084766ENSMUST00000143391ENSMUSG00000085260ENSMUST00000129175ENSMUST00000139794ENSMUST00000146334ENSMUSG00000085551ENSMUST00000130205
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NW_0001ENSG00000141026ENST00000268711ENST00000585041ENST00000624097ENSG00000205309ENST00000389022ENST00000470418ENST00000478373ENST00000480529ENST00000483704ENST00000582909ENST00000616989ENSG00000215030ENST00000392730ENSG00000227158ENST00000381380CIL_0000NW_0002ENSMUSG00000019373ENSMUST00000019517ENSMUST00000156837ENSMUSG00000032615ENSMUST00000102695ENSMUST00000137695ENSMUST00000149076ENSMUSG00000061650ENSMUST00000081980ENSMUSG00000084766ENSMUST00000143391ENSMUSG00000085260ENSMUST00000129175ENSMUST00000139794ENSMUST00000146334ENSMUSG00000085551ENSMUST00000130205
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141026 ENST00000268711 6.741±0.00 7.191±0.00 1.078±0.00 9.415±3.27 6.911±0.00 3.083±2.33 6.638±3.94 7.510±5.89 2.895±1.17 2.742±1.43 5.126±1.25 5.628±2.84 7.151±1.64 10.484±0.97
ENST00000580462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.377±0.00 N/A N/A N/A
ENST00000624097 N/A 0.472±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.986±0.00
ENSG00000205309 ENST00000389022 N/A 1.353±0.00 N/A 1.354±0.60 0.563±0.00 2.340±0.00 2.131±0.00 0.944±0.00 0.143±0.00 N/A 1.916±0.00 1.030±0.00 1.293±0.44 5.379±2.58
ENST00000470418 N/A N/A N/A 0.807±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478373 N/A N/A N/A N/A N/A 0.500±0.00 N/A N/A N/A N/A 0.814±0.00 N/A N/A N/A
ENST00000480529 N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A
ENST00000483704 0.164±0.00 N/A N/A 1.032±0.00 N/A N/A 0.133±0.00 0.227±0.00 0.106±0.00 0.837±0.00 N/A 0.246±0.04 0.367±0.00 2.476±0.13
ENST00000582909 0.551±0.00 N/A N/A N/A N/A N/A N/A 0.979±0.00 N/A N/A N/A 0.473±0.00 N/A N/A
ENST00000616989 0.617±0.00 N/A N/A N/A 1.305±0.00 N/A N/A N/A N/A N/A 1.513±0.00 1.245±0.83 0.594±0.00 1.262±0.00
ENSG00000215030 ENST00000392730 18.861±0.00 4.370±0.00 0.257±0.00 0.929±0.73 2.084±0.26 3.680±0.02 2.099±1.89 0.678±0.27 1.151±0.18 2.044±0.75 8.558±7.30 2.541±1.65 27.062±35.65 1.152±0.48
ENSG00000227158 ENST00000381380 0.680±0.00 0.095±0.00 N/A 0.203±0.00 0.339±0.29 0.257±0.00 0.028±0.00 N/A N/A N/A N/A 0.039±0.00 0.133±0.07 0.033±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019373 ENSMUST00000019517 17.194±6.37 N/A 18.784±1.99 24.263±2.33 12.562±3.71 8.495±1.02 14.659±0.67 9.881±0.17 19.010±13.22 7.427±0.00 34.693±3.21 16.537±10.65 33.486±10.85 30.163±1.22
ENSMUST00000124101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156837 N/A N/A N/A 14.903±0.00 N/A N/A N/A N/A N/A N/A N/A 15.078±0.00 38.077±2.30 37.287±0.00
ENSMUSG00000032615 ENSMUST00000102695 8.991±0.65 21.502±5.35 7.895±0.00 20.718±6.77 9.002±3.94 5.551±2.29 10.965±1.07 9.794±1.03 5.307±1.79 3.148±0.00 13.404±0.30 13.447±5.06 N/A N/A
ENSMUST00000137695 N/A N/A N/A N/A 3.146±0.00 N/A N/A 3.313±0.12 2.427±0.56 2.125±0.00 N/A 4.053±0.00 N/A N/A
ENSMUST00000149076 9.538±2.24 15.069±5.95 N/A 13.669±6.78 7.092±0.24 7.070±1.42 5.001±0.36 4.874±0.77 3.791±2.02 4.271±0.00 N/A 9.345±2.25 11.718±0.00 37.130±13.22
ENSMUST00000154699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061650 ENSMUST00000081980 16.588±0.76 28.737±0.91 7.610±0.46 7.946±1.72 9.701±3.54 11.458±2.24 8.769±0.62 9.863±2.23 6.316±3.17 9.924±0.88 8.084±0.65 19.150±5.84 8.776±2.73 15.074±4.81
ENSMUSG00000084766 ENSMUST00000143391 N/A N/A N/A 0.066±0.02 N/A 0.216±0.01 N/A 0.054±0.00 N/A N/A N/A 0.162±0.12 0.097±0.06 0.082±0.02
ENSMUSG00000085260 ENSMUST00000129175 N/A N/A 0.461±0.02 0.692±0.00 N/A N/A N/A N/A N/A N/A 0.598±0.00 2.812±1.62 0.523±0.10 145.298±0.00
ENSMUST00000139794 0.163±0.00 N/A N/A 0.241±0.00 N/A N/A 0.119±0.00 0.847±0.00 0.133±0.06 N/A 0.287±0.13 N/A N/A N/A
ENSMUST00000146334 1.014±0.52 1.229±0.82 0.708±0.03 0.748±0.34 0.553±0.26 0.414±0.09 0.345±0.16 1.100±0.21 0.589±0.28 1.500±0.16 0.381±0.14 1.859±0.66 0.181±0.05 75.952±17.55
ENSMUSG00000085551 ENSMUST00000130205 N/A 0.735±0.23 N/A 1.142±0.00 N/A 2.192±1.03 0.392±0.12 1.669±0.76 0.195±0.00 0.866±0.34 N/A 0.755±0.40 0.046±0.00 3.838±3.52

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