C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oxysterol binding protein-like 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141447 OSBPL1A 9606 - 18:24162044-24397880 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319481 OSBPL1A-001 24162044-24397859 protein_coding
  ENST00000357041 OSBPL1A-003 24163134-24311516 protein_coding
  ENST00000399441 OSBPL1A-005 24357125-24397788 protein_coding
  ENST00000399443 OSBPL1A-002 24162045-24272232 protein_coding
  ENST00000578013 OSBPL1A-017 24163157-24179835 protein_coding
  ENST00000578055 OSBPL1A-015 24171480-24271685 nonsense_mediated_decay
  ENST00000578091 OSBPL1A-004 24280842-24397880 nonsense_mediated_decay
  ENST00000579764 OSBPL1A-012 24347658-24397788 processed_transcript
  ENST00000579851 OSBPL1A-009 24280842-24397823 nonsense_mediated_decay
  ENST00000581043 OSBPL1A-013 24280842-24311532 processed_transcript
  ENST00000581343 OSBPL1A-008 24367934-24377538 retained_intron
  ENST00000582350 OSBPL1A-011 24347665-24397784 processed_transcript
  ENST00000582618 OSBPL1A-007 24366405-24397841 processed_transcript
  ENST00000582645 OSBPL1A-010 24318756-24397855 nonsense_mediated_decay
  ENST00000584119 OSBPL1A-014 24225067-24311522 nonsense_mediated_decay
  ENST00000585247 OSBPL1A-016 24196035-24271611 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000319481ENST00000357041ENST00000399443ENST00000578013ENST00000578055ENST00000584119
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000319481 2.836±0.00 2.484±0.00 N/A N/A 1.871±0.00 1.247±0.00 N/A N/A 2.152±0.00 1.346±0.00 N/A 2.416±0.98 N/A
ENST00000357041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.181±0.00 3.495±0.00
ENST00000399443 17.912±0.00 16.494±0.00 3.341±0.00 32.501±8.42 16.463±13.57 17.623±14.53 17.676±13.46 9.708±8.64 3.068±0.51 5.672±3.30 19.180±13.77 5.233±2.44 2.468±0.79
ENST00000578013 N/A N/A 3.021±0.00 27.104±0.00 4.705±0.00 6.998±0.00 3.337±0.00 2.572±0.00 5.469±0.00 N/A 3.784±0.00 5.273±1.76 4.234±0.00
ENST00000578055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.432±0.00 N/A N/A
ENST00000584119 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.268±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WS CIL_0005WS_0001 CGP 18:24138956-24397880
CIL_0005WR CIL_0005WR_0001 CGP 18:24162044-24453535

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005543 NAS phospholipid binding
GO:0005622 IC intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005765 TAS lysosomal membrane
GO:0005770 IDA late endosome
GO:0006869 IEA lipid transport
GO:0008203 NAS cholesterol metabolic process
GO:0015485 IDA cholesterol binding
GO:0016192 NAS vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011281 osbpl1a oxysterol binding protein-like 1A protein_coding Danio_rerio
ENSDARG00000053746 OSBPL1A (2 of 2) oxysterol binding protein-like 1A protein_coding Danio_rerio
ENSMUSG00000044252 Osbpl1a oxysterol binding protein-like 1A protein_coding Mus_musculus

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