C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cerebellin 2 precursor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141668 CBLN2 9606 - 18:72536680-72638521 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269503 CBLN2-001 72536680-72544539 protein_coding
  ENST00000580889 CBLN2-007 72544453-72638455 processed_transcript
  ENST00000581073 CBLN2-006 72538150-72638517 protein_coding
  ENST00000581425 CBLN2-003 72536684-72540298 retained_intron
  ENST00000582667 CBLN2-009 72620468-72631081 processed_transcript
  ENST00000583570 CBLN2-008 72620212-72638521 processed_transcript
  ENST00000583651 CBLN2-005 72538111-72543229 processed_transcript
  ENST00000584764 CBLN2-004 72538020-72543554 protein_coding
  ENST00000585159 CBLN2-002 72536680-72543554 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000269503ENST00000581425ENST00000583651ENST00000584764ENST00000585159
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000269503 N/A 0.105±0.00 4.083±0.00 N/A 0.450±0.00 N/A N/A N/A N/A 0.080±0.00
ENST00000581425 N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A 0.033±0.00
ENST00000583651 N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A
ENST00000584764 N/A N/A N/A 0.242±0.00 N/A N/A N/A 0.335±0.00 N/A 0.156±0.00
ENST00000585159 0.047±0.00 N/A 5.259±0.77 0.077±0.02 N/A 0.140±0.00 0.020±0.00 0.056±0.06 0.036±0.00 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001A CIL_00001A_0003 CGP 18:70288901-72638521

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0051965 IEA positive regulation of synapse assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074601 cbln2a cerebellin 2a precursor protein_coding Danio_rerio
ENSDARG00000077151 cbln2b cerebellin 2b precursor protein_coding Danio_rerio
ENSMUSG00000024647 Cbln2 cerebellin 2 precursor protein protein_coding Mus_musculus

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