C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015863-ENSDARG00000074601 CGP 7955 2:30138260-30175125
GeneTranscriptPositionBiotype
ENSDARG00000015863 (socs6b)
suppressor of cytokine signaling 6b 		ENSDART00000012990 (socs6b-201) 30142503-30145177 protein_coding
ENSDART00000139871 (socs6b-001) 30138260-30145177 protein_coding
ENSDARG00000074601 (cbln2a)
cerebellin 2a precursor 		ENSDART00000113193 (cbln2a-001) 30173538-30175125 protein_coding
CIL_00001A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058565-ENSDARG00000077151 CGP 7955 24:15181349-15552769
GeneTranscriptPositionBiotype
ENSDARG00000058565 (BX640518.1)
Uncharacterized protein 		ENSDART00000081449 (BX640518.1-201) 15181349-15182908 protein_coding
ENSDARG00000077151 (cbln2b)
cerebellin 2b precursor 		ENSDART00000112644 (cbln2b-201) 15549597-15552139 protein_coding
ENSDART00000136200 (cbln2b-001) 15549601-15552769 protein_coding
CIL_00001A_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170677-ENSG00000141668 CGP 9606 18:70288901-72638521
GeneTranscriptPositionBiotype
ENSG00000141668 (CBLN2)
cerebellin 2 precursor 		ENST00000269503 (CBLN2-001) 72536680-72544539 protein_coding
ENST00000580889 (CBLN2-007) 72544453-72638455 processed_transcript
ENST00000581073 (CBLN2-006) 72538150-72638517 protein_coding
ENST00000581425 (CBLN2-003) 72536684-72540298 retained_intron
ENST00000582667 (CBLN2-009) 72620468-72631081 processed_transcript
ENST00000583570 (CBLN2-008) 72620212-72638521 processed_transcript
ENST00000583651 (CBLN2-005) 72538111-72543229 processed_transcript
ENST00000584764 (CBLN2-004) 72538020-72543554 protein_coding
ENST00000585159 (CBLN2-002) 72536680-72543554 protein_coding
ENSG00000170677 (SOCS6)
suppressor of cytokine signaling 6 		ENST00000397942 (SOCS6-001) 70288901-70330200 protein_coding
ENST00000578377 (SOCS6-003) 70296599-70325351 protein_coding
ENST00000582322 (SOCS6-002) 70314190-70327116 protein_coding
ENSG00000214255 (RPS2P6)
ribosomal protein S2 pseudogene 6 		ENST00000479476 (RPS2P6-001) 70430231-70431125 processed_pseudogene
ENSG00000239748 (RN7SL795P)
RNA, 7SL, cytoplasmic 795, pseudogene 		ENST00000469617 (RN7SL795P-201) 70512727-70513008 misc_RNA
ENSG00000260457 (RP11-723G8.1)
 ENST00000563639 (RP11-723G8.1-001) 71837039-71870788 lincRNA
ENSG00000260676 (RP11-510D19.1)
long intergenic non-protein coding RNA 1541 		ENST00000566582 (RP11-510D19.1-002) 71520249-71578937 lincRNA
ENST00000568095 (RP11-510D19.1-001) 71519962-71578956 lincRNA
ENSG00000263417 (GTSCR1)
Gilles de la Tourette syndrome chromosome region, candidate 1 (non-protein coding) 		ENST00000582578 (GTSCR1-001) 70630534-70650744 lincRNA
ENSG00000263733 (RP11-47G4.1)
 ENST00000583587 (RP11-47G4.1-001) 71225704-71226721 processed_pseudogene
ENSG00000264315 (HNRNPA1P11)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 11 		ENST00000580106 (HNRNPA1P11-001) 72618267-72619222 processed_pseudogene
ENSG00000264388 (RP11-752P2.1)
 ENST00000580637 (RP11-752P2.1-001) 71588537-71588884 processed_pseudogene
ENSG00000265352 (RP11-723G8.2)
 ENST00000580323 (RP11-723G8.2-003) 71782076-71788128 lincRNA
ENST00000583756 (RP11-723G8.2-001) 71732615-71782226 lincRNA
ENST00000584810 (RP11-723G8.2-002) 71779556-71782281 lincRNA
ENSG00000265484 (RP11-47G4.2)
 ENST00000581940 (RP11-47G4.2-001) 71216704-71237102 lincRNA
ENSG00000265698 (LARP7P3)
La ribonucleoprotein domain family, member 7 pseudogene 3 		ENST00000579888 (LARP7P3-001) 70412055-70412391 processed_pseudogene
ENSG00000265946 (RP11-752P2.2)
 ENST00000582687 (RP11-752P2.2-001) 71665148-71665525 processed_pseudogene
ENSG00000265995 (RP11-736G13.1)
 ENST00000580927 (RP11-736G13.1-001) 71890409-71944577 lincRNA
ENSG00000266258 (RP11-41O4.1)
 ENST00000583247 (RP11-41O4.1-002) 70336448-70352119 lincRNA
ENST00000584919 (RP11-41O4.1-001) 70335439-70352459 lincRNA
ENSG00000266278 (RP11-41O4.2)
 ENST00000582251 (RP11-41O4.2-001) 70380140-70384591 lincRNA
ENSG00000266304 (RP11-484N16.1)
 ENST00000578633 (RP11-484N16.1-001) 70335929-70337310 lincRNA
ENSG00000278971 (RP11-644A7.2)
 ENST00000624049 (RP11-644A7.2-001) 70489630-70491205 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001A_0001ENSDARG00000015863ENSDART00000012990ENSDART00000139871ENSDARG00000074601ENSDART00000113193CIL_00001A_0002ENSDARG00000058565ENSDART00000081449ENSDARG00000077151ENSDART00000112644ENSDART00000136200CIL_00001A_0003ENSG00000141668ENST00000269503ENST00000580889ENST00000581073ENST00000581425ENST00000582667ENST00000583570ENST00000583651ENST00000584764ENST00000585159ENSG00000170677ENST00000397942ENST00000578377ENST00000582322ENSG00000214255ENST00000479476ENSG00000239748ENST00000469617ENSG00000260457ENST00000563639ENSG00000260676ENST00000566582ENST00000568095ENSG00000263417ENST00000582578ENSG00000263733ENST00000583587ENSG00000264315ENST00000580106ENSG00000264388ENST00000580637ENSG00000265352ENST00000580323ENST00000583756ENST00000584810ENSG00000265484ENST00000581940ENSG00000265698ENST00000579888ENSG00000265946ENST00000582687ENSG00000265995ENST00000580927ENSG00000266258ENST00000583247ENST00000584919ENSG00000266278ENST00000582251ENSG00000266304ENST00000578633ENSG00000278971ENST00000624049
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001A_0001ENSDARG00000015863ENSDART00000012990ENSDART00000139871ENSDARG00000074601ENSDART00000113193CIL_00001A_0002ENSDARG00000058565ENSDART00000081449ENSDARG00000077151ENSDART00000112644ENSDART00000136200CIL_00001A_0003ENSG00000141668ENST00000269503ENST00000581425ENST00000583651ENST00000584764ENST00000585159ENSG00000170677ENST00000397942ENST00000578377ENST00000582322ENSG00000214255ENST00000479476ENSG00000239748ENST00000469617ENSG00000260457ENST00000563639ENSG00000260676ENST00000566582ENST00000568095ENSG00000263417ENST00000582578ENSG00000263733ENST00000583587ENSG00000264315ENST00000580106ENSG00000264388ENST00000580637ENSG00000265352ENST00000580323ENST00000583756ENSG00000265484ENST00000581940ENSG00000265698ENST00000579888ENSG00000265946ENST00000582687ENSG00000265995ENST00000580927ENSG00000266258ENST00000583247ENST00000584919ENSG00000266278ENST00000582251ENSG00000266304ENST00000578633ENSG00000278971ENST00000624049
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015863 ENSDART00000012990 N/A N/A N/A 5.555±2.85 N/A N/A 1.641±1.54 0.809±0.75 0.524±0.00 N/A 1.355±0.00 N/A N/A N/A
ENSDART00000139871 N/A N/A N/A 3.705±1.64 N/A N/A 2.322±0.68 3.509±0.00 0.148±0.00 N/A 0.621±0.00 N/A N/A N/A
ENSDARG00000074601 ENSDART00000113193 N/A N/A N/A 16.809±15.39 N/A N/A N/A 0.156±0.00 N/A N/A 0.370±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058565 ENSDART00000081449 N/A N/A N/A 0.743±0.00 N/A N/A 1.009±0.01 0.351±0.00 0.321±0.00 N/A 0.632±0.00 N/A N/A N/A
ENSDARG00000077151 ENSDART00000112644 N/A N/A N/A 23.643±9.71 N/A N/A N/A N/A N/A N/A 0.774±0.00 N/A N/A N/A
ENSDART00000136200 N/A N/A N/A 8.953±3.73 N/A N/A 0.114±0.00 0.159±0.00 N/A N/A 0.494±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141668 ENST00000269503 N/A N/A 0.105±0.00 4.083±0.00 N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A N/A 0.080±0.00
ENST00000580889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581425 N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A 0.033±0.00
ENST00000582667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A
ENST00000584764 N/A N/A N/A N/A 0.242±0.00 N/A N/A N/A N/A N/A N/A 0.335±0.00 N/A 0.156±0.00
ENST00000585159 0.047±0.00 N/A N/A 5.259±0.77 0.077±0.02 N/A N/A 0.140±0.00 0.020±0.00 N/A N/A 0.056±0.06 0.036±0.00 0.055±0.00
ENSG00000170677 ENST00000397942 1.328±0.00 1.087±0.00 N/A 1.608±0.60 1.919±1.09 2.122±1.04 1.732±0.40 3.124±0.00 1.958±0.38 0.726±0.25 4.608±0.00 2.126±1.10 1.240±0.01 1.977±0.00
ENST00000578377 N/A N/A 3.130±0.00 N/A N/A N/A N/A 7.517±0.00 N/A N/A 2.249±0.00 N/A N/A N/A
ENST00000582322 1.155±0.00 0.648±0.00 N/A 2.481±0.30 1.327±0.00 4.656±0.00 1.400±0.36 1.504±0.00 3.078±0.00 3.617±0.00 0.801±0.00 1.958±1.01 1.564±0.38 1.247±0.23
ENSG00000214255 ENST00000479476 0.118±0.00 0.189±0.00 N/A N/A 0.035±0.00 0.094±0.00 N/A 0.102±0.00 0.029±0.00 0.064±0.00 0.191±0.00 0.046±0.00 N/A 0.386±0.00
ENSG00000239748 ENST00000469617 0.073±0.00 0.233±0.00 N/A N/A N/A 0.222±0.00 N/A N/A 0.287±0.00 2.150±0.00 N/A 0.353±0.00 N/A 0.217±0.00
ENSG00000260457 ENST00000563639 N/A N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A 0.096±0.04
ENSG00000260676 ENST00000566582 0.028±0.00 0.023±0.00 0.019±0.00 0.023±0.00 0.011±0.00 0.013±0.00 0.022±0.00 0.029±0.00 N/A 0.018±0.00 0.010±0.00 0.130±0.00 0.074±0.00 0.034±0.00
ENST00000568095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A
ENSG00000263417 ENST00000582578 N/A 0.474±0.00 N/A N/A N/A 0.029±0.00 N/A N/A 0.056±0.00 N/A N/A N/A N/A 0.322±0.13
ENSG00000263733 ENST00000583587 N/A N/A N/A N/A N/A 0.532±0.00 N/A N/A N/A N/A N/A N/A N/A 0.981±0.00
ENSG00000264315 ENST00000580106 N/A 0.046±0.00 N/A 0.047±0.00 0.031±0.00 N/A N/A 0.015±0.00 N/A N/A N/A N/A 0.022±0.00 0.036±0.01
ENSG00000264388 ENST00000580637 N/A N/A N/A N/A N/A 0.630±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265352 ENST00000580323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.596±0.00
ENST00000583756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.295±0.00
ENST00000584810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265484 ENST00000581940 0.022±0.00 0.625±0.00 N/A 0.047±0.00 0.069±0.00 N/A N/A 0.348±0.00 N/A N/A N/A 0.036±0.00 N/A 0.467±0.28
ENSG00000265698 ENST00000579888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.07
ENSG00000265946 ENST00000582687 N/A 0.158±0.00 N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A 0.105±0.00
ENSG00000265995 ENST00000580927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00
ENSG00000266258 ENST00000583247 0.037±0.00 N/A N/A N/A N/A 0.106±0.00 N/A 0.265±0.00 1.974±0.00 0.035±0.00 N/A 0.510±0.25 0.144±0.03 0.046±0.00
ENST00000584919 N/A N/A N/A 0.165±0.00 0.037±0.02 N/A 0.147±0.00 0.381±0.13 0.069±0.00 N/A N/A 0.180±0.16 0.048±0.01 0.102±0.00
ENSG00000266278 ENST00000582251 0.044±0.00 0.159±0.00 N/A 0.057±0.00 0.029±0.00 0.045±0.00 0.037±0.00 0.074±0.00 0.043±0.00 0.028±0.01 0.009±0.00 0.015±0.01 N/A 0.032±0.02
ENSG00000266304 ENST00000578633 N/A N/A N/A N/A 0.074±0.00 N/A 1.191±0.94 N/A 4.118±0.00 N/A N/A N/A 0.221±0.11 0.399±0.00
ENSG00000278971 ENST00000624049 N/A 0.006±0.00 0.243±0.00 0.185±0.16 0.017±0.00 0.006±0.00 N/A N/A N/A 0.035±0.00 N/A 0.017±0.00 0.029±0.00 0.214±0.19

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