C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD and tetratricopeptide repeats 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000142784 WDTC1 9606 + 1:27234516-27308633 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319394 WDTC1-201 27234516-27308633 protein_coding
  ENST00000361771 WDTC1-001 27234668-27308244 protein_coding
  ENST00000447062 WDTC1-003 27261048-27308241 nonsense_mediated_decay
  ENST00000472249 WDTC1-004 27305014-27306890 nonsense_mediated_decay
  ENST00000491239 WDTC1-002 27287709-27308619 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319394ENST00000361771ENST00000447062ENST00000472249ENST00000491239
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319394 N/A N/A 0.483±0.00 1.352±0.52 N/A N/A N/A N/A N/A N/A N/A 3.122±2.90 2.213±0.00 4.669±0.00
ENST00000361771 12.684±0.00 6.499±0.00 N/A 7.825±0.00 11.666±0.00 7.827±6.13 7.206±5.98 5.706±4.13 7.359±0.00 8.723±8.02 24.002±0.00 9.756±2.52 8.962±1.83 22.144±1.14
ENST00000447062 9.918±0.00 5.876±0.00 2.576±0.00 5.027±2.61 4.969±2.16 4.924±3.32 5.545±3.93 4.798±4.02 2.895±0.16 8.423±0.00 12.844±8.86 4.194±2.15 5.992±1.19 12.044±0.41
ENST00000472249 N/A N/A 5.511±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.766±0.00 N/A N/A
ENST00000491239 N/A 1.897±0.00 N/A N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A 1.685±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0001 VISTA 1:27203963-27805666

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001701 IEA in utero embryonic development
GO:0004857 IEA enzyme inhibitor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 IEA cytosol
GO:0006006 IEA glucose metabolic process
GO:0008361 IEA regulation of cell size
GO:0016567 IEA protein ubiquitination
GO:0032869 IEA cellular response to insulin stimulus
GO:0035264 IEA multicellular organism growth
GO:0042393 IEA histone binding
GO:0042826 IEA histone deacetylase binding
GO:0043086 IEA negative regulation of catalytic activity
GO:0045717 IEA negative regulation of fatty acid biosynthetic process
GO:0055082 IEA cellular chemical homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059760 wdtc1 WD and tetratricopeptide repeats 1 protein_coding Danio_rerio
ENSMUSG00000037622 Wdtc1 WD and tetratricopeptide repeats 1 protein_coding Mus_musculus

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