C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD and tetratricopeptide repeats 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447062 WDTC1-003 ENSG00000142784 9606 + 1:27261048-27308241 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000447062
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000447062 9.918±0.00 5.876±0.00 2.576±0.00 5.027±2.61 4.969±2.16 4.924±3.32 5.545±3.93 4.798±4.02 2.895±0.16 8.423±0.00 12.844±8.86 4.194±2.15 5.992±1.19 12.044±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0001 VISTA 1:27203963-27805666

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0016567 IEA protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105906 Wdtc1-002 protein_coding Mus_musculus 0 2745
ENSMUST00000043305 Wdtc1-001 protein_coding Mus_musculus 0 2128
ENSMUST00000135929 Wdtc1-004 processed_transcript Mus_musculus 0 625
ENSDART00000113358 wdtc1-001 protein_coding Danio_rerio 0 520
ENSMUST00000145426 Wdtc1-005 processed_transcript Mus_musculus 0 309
ENSMUST00000140976 Wdtc1-003 processed_transcript Mus_musculus 0 195
ENSDART00000154023 wdtc1-002 protein_coding Danio_rerio 3e-28 132

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