C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DDB1 and CUL4 associated factor 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143164 DCAF6 9606 + 1:167935783-168075843 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312263 DCAF6-003 167936708-168075834 protein_coding
  ENST00000367840 DCAF6-001 167936818-168075834 protein_coding
  ENST00000367843 DCAF6-011 167936661-168075843 protein_coding
  ENST00000432587 DCAF6-201 167936559-168075841 protein_coding
  ENST00000450548 DCAF6-007 167935783-167987547 processed_transcript
  ENST00000455334 DCAF6-009 167937153-167993330 processed_transcript
  ENST00000460432 DCAF6-010 168015887-168019961 processed_transcript
  ENST00000470721 DCAF6-002 167936673-168024050 nonsense_mediated_decay
  ENST00000470919 DCAF6-008 167936274-167991339 processed_transcript
  ENST00000478668 DCAF6-006 168045081-168063967 retained_intron
  ENST00000489398 DCAF6-004 168042730-168075786 retained_intron
  ENST00000491067 DCAF6-005 167968490-167991339 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312263ENST00000367840ENST00000367843ENST00000432587ENST00000470721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312263 8.815±0.00 2.409±0.00 4.367±0.00 9.996±4.68 4.503±0.00 6.594±2.36 4.842±0.00 8.757±0.65 8.380±0.00 2.579±0.00 13.348±0.00 8.734±2.22 8.480±2.20 23.395±7.22
ENST00000367840 N/A N/A N/A N/A N/A N/A 10.028±3.69 N/A N/A N/A 34.386±0.95 N/A N/A N/A
ENST00000367843 N/A N/A 1.556±0.00 3.349±0.00 N/A N/A 15.214±0.00 N/A 2.332±0.00 3.688±0.00 N/A N/A 3.753±0.13 N/A
ENST00000432587 N/A N/A N/A N/A 8.222±0.00 N/A N/A N/A N/A N/A 34.022±0.00 N/A N/A N/A
ENST00000470721 N/A N/A N/A N/A 3.478±0.00 N/A N/A N/A 3.035±0.00 N/A N/A 5.862±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0016567 IEA protein ubiquitination
GO:0030374 IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0080008 IDA Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078311 dcaf6 ddb1 and cul4 associated factor 6 protein_coding Danio_rerio
ENSMUSG00000026571 Dcaf6 DDB1 and CUL4 associated factor 6 protein_coding Mus_musculus

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