C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DDB1 and CUL4 associated factor 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026571 Dcaf6 10090 - 1:165329511-165460465 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027856 Dcaf6-001 165329511-165460465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027856
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027856 13.024±2.07 20.864±5.06 11.678±1.61 12.317±7.73 12.686±3.42 8.248±2.49 5.943±0.72 9.604±1.06 13.020±4.19 13.704±0.75 24.976±3.29 12.747±3.33 7.877±2.87 18.952±4.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CW CIL_0005CW_0002 CGP 1:165301863-165460465
CIL_0005MN CIL_0005MN_0002 CGP 1:165329511-165481214

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0016567 IEA protein ubiquitination
GO:0030374 IEA ligand-dependent nuclear receptor transcription coactivator activity
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0080008 ISS Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078311 dcaf6 ddb1 and cul4 associated factor 6 protein_coding Danio_rerio
ENSG00000143164 DCAF6 DDB1 and CUL4 associated factor 6 protein_coding Homo_sapiens

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