C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143252 SDHC 9606 + 1:161314257-161375340 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342751 SDHC-003 161314381-161363189 protein_coding
  ENST00000367975 SDHC-001 161314257-161375340 protein_coding
  ENST00000392169 SDHC-006 161314388-161362433 protein_coding
  ENST00000432287 SDHC-005 161314382-161362461 protein_coding
  ENST00000437833 SDHC-012 161368022-161371964 processed_transcript
  ENST00000470743 SDHC-011 161323614-161362657 nonsense_mediated_decay
  ENST00000504963 SDHC-009 161314391-161362452 nonsense_mediated_decay
  ENST00000513009 SDHC-007 161314388-161362540 protein_coding
  ENST00000515731 SDHC-008 161314381-161328495 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342751ENST00000367975ENST00000392169ENST00000432287ENST00000437833ENST00000470743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342751 28.949±0.00 23.835±0.00 N/A 26.195±0.00 49.349±0.00 15.274±11.28 60.564±0.00 34.860±28.49 54.626±0.00 32.782±0.00 27.800±0.00 52.826±43.12 54.769±10.89 34.943±6.42
ENST00000367975 1.496±0.00 1.554±0.00 1.279±0.00 2.110±0.00 1.753±1.43 1.509±0.80 2.837±1.87 2.306±1.16 1.412±0.37 0.696±0.31 3.601±0.29 1.865±0.63 0.912±0.22 1.570±0.18
ENST00000392169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.152±0.00 N/A
ENST00000432287 N/A 21.277±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.233±0.00
ENST00000470743 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.914±0.00 N/A N/A 22.434±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000104 IEA succinate dehydrogenase activity
GO:0005739 TAS mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005749 ISS mitochondrial respiratory chain complex II
GO:0006099 IEA tricarboxylic acid cycle
GO:0009055 IEA electron carrier activity
GO:0009060 TAS aerobic respiration
GO:0016021 TAS integral component of membrane
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0020037 ISS heme binding
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045273 TAS respiratory chain complex II
GO:0045281 IEA succinate dehydrogenase complex
GO:0046872 IEA metal ion binding
GO:0055114 TAS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038608 sdhc succinate dehydrogenase complex, subunit C, integral membrane protein protein_coding Danio_rerio
ENSMUSG00000058076 Sdhc succinate dehydrogenase complex, subunit C, integral membrane protein protein_coding Mus_musculus

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