C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367975 SDHC-001 ENSG00000143252 9606 + 1:161314257-161375340 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367975
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367975 1.496±0.00 1.554±0.00 1.279±0.00 2.110±0.00 1.753±1.43 1.509±0.80 2.837±1.87 2.306±1.16 1.412±0.37 0.696±0.31 3.601±0.29 1.865±0.63 0.912±0.22 1.570±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000104 IEA succinate dehydrogenase activity
GO:0005739 TAS mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005749 ISS mitochondrial respiratory chain complex II
GO:0006099 IEA tricarboxylic acid cycle
GO:0009055 IEA electron carrier activity
GO:0009060 TAS aerobic respiration
GO:0016021 TAS integral component of membrane
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0020037 ISS heme binding
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045273 TAS respiratory chain complex II
GO:0045281 IEA succinate dehydrogenase complex
GO:0046872 IEA metal ion binding
GO:0055114 TAS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027959 1700009P17Rik-001 protein_coding Mus_musculus 0 204
ENSMUST00000151340 1700009P17Rik-003 protein_coding Mus_musculus 0 204
ENSMUST00000129651 1700009P17Rik-002 protein_coding Mus_musculus 0 204
ENSMUST00000124157 1700009P17Rik-007 protein_coding Mus_musculus 0 202
ENSMUST00000127394 1700009P17Rik-005 protein_coding Mus_musculus 3e-23 117
ENSMUST00000156789 1700009P17Rik-008 nonsense_mediated_decay Mus_musculus 0.00000000001 79
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000000007 73
ENSMUST00000143623 1700009P17Rik-006 nonsense_mediated_decay Mus_musculus 0.000000002 71

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