C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box protein 28
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143756 FBXO28 9606 + 1:224114087-224162047 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366862 FBXO28-001 224114087-224162047 protein_coding
  ENST00000424254 FBXO28-003 224114111-224158150 protein_coding
  ENST00000483773 FBXO28-002 224114171-224134365 retained_intron
  ENST00000519894 FBXO28-004 224114218-224131021 retained_intron
  ENST00000523990 FBXO28-005 224114119-224158182 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366862ENST00000424254ENST00000523990
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366862 4.105±0.00 2.971±0.00 2.029±0.00 4.845±0.60 1.986±0.30 3.209±0.87 2.991±1.03 3.192±0.08 3.316±1.21 2.945±2.03 4.085±0.00 3.538±1.83 2.797±0.07 3.591±1.94
ENST00000424254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.738±0.00 3.739±0.00 3.256±0.00 6.724±0.00
ENST00000523990 N/A N/A N/A N/A 1.880±0.00 2.630±0.00 N/A N/A N/A N/A N/A 3.866±1.01 1.255±0.00 3.423±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BY CIL_0000BY_0002 CGP 1:224114087-224193441

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027159 fbxo28 F-box protein 28 protein_coding Danio_rerio
ENSMUSG00000047539 Fbxo28 F-box protein 28 protein_coding Mus_musculus

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