C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, non-receptor type 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143851 PTPN7 9606 - 1:202147013-202161588 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309017 PTPN7-001 202147013-202161581 protein_coding
  ENST00000367279 PTPN7-003 202147013-202159991 protein_coding
  ENST00000435759 PTPN7-015 202155561-202160608 protein_coding
  ENST00000462815 PTPN7-010 202148213-202160608 nonsense_mediated_decay
  ENST00000464870 PTPN7-018 202155537-202160608 protein_coding
  ENST00000467283 PTPN7-017 202155537-202160608 protein_coding
  ENST00000468385 PTPN7-008 202158458-202160608 retained_intron
  ENST00000476061 PTPN7-020 202154239-202160602 protein_coding
  ENST00000477554 PTPN7-005 202148500-202161581 protein_coding
  ENST00000477625 PTPN7-013 202152538-202160644 protein_coding
  ENST00000479092 PTPN7-014 202154186-202160615 processed_transcript
  ENST00000480836 PTPN7-007 202148439-202160615 nonsense_mediated_decay
  ENST00000486116 PTPN7-016 202155581-202160608 protein_coding
  ENST00000491584 PTPN7-019 202157964-202160605 retained_intron
  ENST00000492451 PTPN7-012 202158118-202161588 protein_coding
  ENST00000492977 PTPN7-004 202149851-202158569 processed_transcript
  ENST00000495688 PTPN7-011 202147015-202160594 nonsense_mediated_decay
  ENST00000496197 PTPN7-009 202148289-202160608 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309017ENST00000367279ENST00000464870ENST00000468385ENST00000477625ENST00000479092ENST00000480836ENST00000486116ENST00000491584ENST00000492977ENST00000495688ENST00000496197
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309017 N/A N/A N/A 0.078±0.00 0.086±0.00 N/A 0.026±0.00 N/A N/A N/A N/A 0.348±0.00 N/A N/A
ENST00000367279 N/A N/A 0.120±0.00 0.086±0.00 N/A N/A N/A 0.454±0.00 0.107±0.00 N/A N/A 0.265±0.00 N/A N/A
ENST00000464870 N/A N/A N/A N/A N/A N/A N/A 0.781±0.00 N/A N/A N/A N/A N/A N/A
ENST00000468385 N/A N/A N/A 0.023±0.00 0.450±0.12 N/A N/A N/A N/A N/A 0.015±0.00 0.150±0.00 N/A N/A
ENST00000477625 N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A
ENST00000479092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.534±0.00 N/A N/A
ENST00000480836 N/A N/A N/A N/A N/A 0.603±0.00 0.172±0.00 N/A N/A N/A 0.057±0.00 N/A N/A N/A
ENST00000486116 N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000491584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A
ENST00000492977 0.141±0.00 N/A N/A N/A 0.344±0.06 0.264±0.00 0.087±0.01 N/A N/A N/A 0.034±0.00 N/A N/A N/A
ENST00000495688 N/A 5.839±0.00 N/A N/A N/A 0.418±0.00 0.018±0.00 0.895±0.00 0.279±0.00 1.601±0.82 N/A 0.048±0.00 0.468±0.17 4.597±1.49
ENST00000496197 N/A N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A 0.728±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0006470 TAS:IEA protein dephosphorylation
GO:0009898 IDA cytoplasmic side of plasma membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031506 Ptpn7 protein tyrosine phosphatase, non-receptor type 7 protein_coding Mus_musculus

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