C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495688 PTPN7-011 ENSG00000143851 9606 - 1:202147015-202160594 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000495688
Transcript ID Adrenal Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000495688 5.839±0.00 0.418±0.00 0.018±0.00 0.895±0.00 0.279±0.00 1.601±0.82 0.048±0.00 0.468±0.17 4.597±1.49

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0006470 TAS:IEA protein dephosphorylation
GO:0009898 IDA cytoplasmic side of plasma membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187985 Ptpn7-002 protein_coding Mus_musculus 0 1454
ENSMUST00000049449 Ptpn7-001 protein_coding Mus_musculus 0 1406
ENSMUST00000167080 Ptpn7-004 protein_coding Mus_musculus 0 1387
ENSMUST00000188478 Ptpn7-003 retained_intron Mus_musculus 0 525

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