C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: echinoderm microtubule associated protein like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143924 EML4 9606 + 2:42169350-42332548 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318522 EML4-001 42169350-42332548 protein_coding
  ENST00000401738 EML4-003 42169461-42330874 protein_coding
  ENST00000402711 EML4-002 42169353-42330744 protein_coding
  ENST00000406175 EML4-006 42285923-42332548 retained_intron
  ENST00000409040 EML4-011 42169381-42261513 retained_intron
  ENST00000472632 EML4-010 42317474-42319998 processed_transcript
  ENST00000480320 EML4-005 42282909-42289913 retained_intron
  ENST00000482660 EML4-009 42169391-42245688 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318522ENST00000401738ENST00000402711ENST00000406175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318522 6.808±0.00 8.767±0.00 0.802±0.00 1.303±0.00 5.845±0.60 4.375±2.49 1.595±0.00 6.243±0.20 4.784±0.00 10.530±0.00 0.441±0.24 12.236±5.81 10.326±2.24 3.845±0.10
ENST00000401738 N/A N/A N/A N/A 4.592±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402711 N/A N/A 3.614±0.00 1.146±0.19 3.027±0.00 2.567±0.00 0.585±0.00 N/A 3.447±0.00 3.326±0.00 N/A 25.967±0.00 14.365±0.00 22.027±0.00
ENST00000406175 N/A 4.290±0.00 1.284±0.00 0.612±0.16 N/A 2.450±0.00 N/A 0.804±0.00 0.700±0.00 3.765±1.92 N/A 9.149±6.82 2.843±1.89 5.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029H CIL_00029H_0001 CGP 2:42048020-42332548
CIL_00029I CIL_00029I_0001 CGP 2:42169350-42425088

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 NAS cytoplasm
GO:0005874 IEA microtubule
GO:0007017 NAS microtubule-based process
GO:0007026 IEA negative regulation of microtubule depolymerization
GO:0007067 NAS mitotic nuclear division
GO:0015630 IEA microtubule cytoskeleton
GO:0016020 IDA membrane
GO:0072686 IEA mitotic spindle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086213 EML4 (1 of 2) echinoderm microtubule associated protein like 4 protein_coding Danio_rerio
ENSDARG00000086525 EML4 (2 of 2) echinoderm microtubule associated protein like 4 protein_coding Danio_rerio
ENSMUSG00000032624 Eml4 echinoderm microtubule associated protein like 4 protein_coding Mus_musculus

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